Hb_001158_110

Information

Type -
Description -
Location Contig1158: 57189-57710
Sequence    

Annotation

kegg
ID tcc:TCM_014696
description Calmodulin binding protein, putative
nr
ID XP_012090790.1
description PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
swissprot
ID Q9ZUZ3
description Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1
trembl
ID A0A067JRG1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26411 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001158_110 0.0 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
2 Hb_000086_720 0.0803493462 - - leucoanthocyanidin dioxygenase, putative [Ricinus communis]
3 Hb_001288_020 0.1099854449 - - -
4 Hb_021888_010 0.1203660253 - - PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Jatropha curcas]
5 Hb_000187_110 0.1331768832 - - PREDICTED: serine carboxypeptidase-like 7 [Jatropha curcas]
6 Hb_001002_090 0.1373893065 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
7 Hb_072997_010 0.1425828236 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
8 Hb_000161_230 0.1451284552 - - lactoylglutathione lyase, putative [Ricinus communis]
9 Hb_002081_220 0.1510708038 - - PREDICTED: uncharacterized protein LOC103707552 [Phoenix dactylifera]
10 Hb_055440_010 0.1513077072 - - protein binding protein, putative [Ricinus communis]
11 Hb_004096_010 0.1571668599 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 40 [Jatropha curcas]
12 Hb_010598_010 0.1628855879 - - PREDICTED: ankyrin-1-like [Jatropha curcas]
13 Hb_009767_030 0.1678005055 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
14 Hb_001862_160 0.172762493 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Jatropha curcas]
15 Hb_001532_060 0.1770574937 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
16 Hb_009070_030 0.1789593251 - - PREDICTED: mechanosensitive ion channel protein 10 [Jatropha curcas]
17 Hb_001377_480 0.1821451352 transcription factor TF Family: MYB Myb domain protein 7, putative [Theobroma cacao]
18 Hb_003768_110 0.1831846123 - - hypothetical protein POPTR_0004s12230g [Populus trichocarpa]
19 Hb_003480_010 0.1832215895 - - cytochrome P450 family protein [Populus trichocarpa]
20 Hb_187211_010 0.1840740421 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]

Gene co-expression network

sample Hb_001158_110 Hb_001158_110 Hb_000086_720 Hb_000086_720 Hb_001158_110--Hb_000086_720 Hb_001288_020 Hb_001288_020 Hb_001158_110--Hb_001288_020 Hb_021888_010 Hb_021888_010 Hb_001158_110--Hb_021888_010 Hb_000187_110 Hb_000187_110 Hb_001158_110--Hb_000187_110 Hb_001002_090 Hb_001002_090 Hb_001158_110--Hb_001002_090 Hb_072997_010 Hb_072997_010 Hb_001158_110--Hb_072997_010 Hb_000086_720--Hb_001288_020 Hb_000086_720--Hb_000187_110 Hb_000086_720--Hb_001002_090 Hb_000086_720--Hb_021888_010 Hb_010598_010 Hb_010598_010 Hb_000086_720--Hb_010598_010 Hb_003413_020 Hb_003413_020 Hb_001288_020--Hb_003413_020 Hb_001288_020--Hb_072997_010 Hb_001005_170 Hb_001005_170 Hb_001288_020--Hb_001005_170 Hb_001288_020--Hb_010598_010 Hb_006573_260 Hb_006573_260 Hb_021888_010--Hb_006573_260 Hb_021888_010--Hb_001002_090 Hb_002081_220 Hb_002081_220 Hb_021888_010--Hb_002081_220 Hb_009767_030 Hb_009767_030 Hb_021888_010--Hb_009767_030 Hb_021888_010--Hb_000187_110 Hb_000161_230 Hb_000161_230 Hb_000187_110--Hb_000161_230 Hb_000979_080 Hb_000979_080 Hb_000187_110--Hb_000979_080 Hb_000187_110--Hb_001002_090 Hb_003226_050 Hb_003226_050 Hb_000187_110--Hb_003226_050 Hb_055440_010 Hb_055440_010 Hb_000187_110--Hb_055440_010 Hb_001633_120 Hb_001633_120 Hb_000187_110--Hb_001633_120 Hb_001002_090--Hb_055440_010 Hb_001002_090--Hb_000979_080 Hb_001002_090--Hb_072997_010 Hb_001002_090--Hb_009767_030 Hb_001776_070 Hb_001776_070 Hb_001002_090--Hb_001776_070 Hb_072997_010--Hb_055440_010 Hb_004096_010 Hb_004096_010 Hb_072997_010--Hb_004096_010 Hb_072997_010--Hb_010598_010 Hb_072997_010--Hb_009767_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0916353 0.597505 0.365974 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.773786 0

CAGE analysis