Hb_072997_010

Information

Type -
Description -
Location Contig72997: 354-1427
Sequence    

Annotation

kegg
ID rcu:RCOM_0737410
description hypothetical protein
nr
ID KDP29976.1
description hypothetical protein JCGZ_18743 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K169
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18743 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_072997_010 0.0 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
2 Hb_055440_010 0.1068469903 - - protein binding protein, putative [Ricinus communis]
3 Hb_004096_010 0.1116089314 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 40 [Jatropha curcas]
4 Hb_001002_090 0.1132300814 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
5 Hb_010598_010 0.11615715 - - PREDICTED: ankyrin-1-like [Jatropha curcas]
6 Hb_009767_030 0.121220673 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
7 Hb_001288_020 0.1276499395 - - -
8 Hb_001158_110 0.1425828236 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
9 Hb_001776_070 0.1438045825 - - PREDICTED: glucan endo-1,3-beta-glucosidase isoform X2 [Jatropha curcas]
10 Hb_001252_050 0.149688252 - - Wall-associated receptor kinase-like 20 [Morus notabilis]
11 Hb_001862_160 0.150027866 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Jatropha curcas]
12 Hb_009070_030 0.1529133371 - - PREDICTED: mechanosensitive ion channel protein 10 [Jatropha curcas]
13 Hb_010164_020 0.1566709434 - - PREDICTED: abscisate beta-glucosyltransferase-like [Jatropha curcas]
14 Hb_013358_030 0.157028281 - - PREDICTED: U-box domain-containing protein 12-like [Jatropha curcas]
15 Hb_000187_110 0.1583736807 - - PREDICTED: serine carboxypeptidase-like 7 [Jatropha curcas]
16 Hb_021888_010 0.1609563183 - - PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Jatropha curcas]
17 Hb_001005_170 0.1633765079 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
18 Hb_001416_170 0.1652879835 - - kinase, putative [Ricinus communis]
19 Hb_000086_720 0.1674527965 - - leucoanthocyanidin dioxygenase, putative [Ricinus communis]
20 Hb_000417_140 0.1702003402 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]

Gene co-expression network

sample Hb_072997_010 Hb_072997_010 Hb_055440_010 Hb_055440_010 Hb_072997_010--Hb_055440_010 Hb_004096_010 Hb_004096_010 Hb_072997_010--Hb_004096_010 Hb_001002_090 Hb_001002_090 Hb_072997_010--Hb_001002_090 Hb_010598_010 Hb_010598_010 Hb_072997_010--Hb_010598_010 Hb_009767_030 Hb_009767_030 Hb_072997_010--Hb_009767_030 Hb_001288_020 Hb_001288_020 Hb_072997_010--Hb_001288_020 Hb_055440_010--Hb_001002_090 Hb_004984_020 Hb_004984_020 Hb_055440_010--Hb_004984_020 Hb_006834_010 Hb_006834_010 Hb_055440_010--Hb_006834_010 Hb_055440_010--Hb_004096_010 Hb_000979_080 Hb_000979_080 Hb_055440_010--Hb_000979_080 Hb_004096_010--Hb_010598_010 Hb_001862_160 Hb_001862_160 Hb_004096_010--Hb_001862_160 Hb_001269_120 Hb_001269_120 Hb_004096_010--Hb_001269_120 Hb_004096_010--Hb_009767_030 Hb_001002_090--Hb_000979_080 Hb_000187_110 Hb_000187_110 Hb_001002_090--Hb_000187_110 Hb_001002_090--Hb_009767_030 Hb_001776_070 Hb_001776_070 Hb_001002_090--Hb_001776_070 Hb_009070_030 Hb_009070_030 Hb_010598_010--Hb_009070_030 Hb_010598_010--Hb_055440_010 Hb_010598_010--Hb_001002_090 Hb_010598_010--Hb_001288_020 Hb_000696_250 Hb_000696_250 Hb_009767_030--Hb_000696_250 Hb_001252_050 Hb_001252_050 Hb_009767_030--Hb_001252_050 Hb_009767_030--Hb_001776_070 Hb_021888_010 Hb_021888_010 Hb_009767_030--Hb_021888_010 Hb_003413_020 Hb_003413_020 Hb_001288_020--Hb_003413_020 Hb_001158_110 Hb_001158_110 Hb_001288_020--Hb_001158_110 Hb_000086_720 Hb_000086_720 Hb_001288_020--Hb_000086_720 Hb_001005_170 Hb_001005_170 Hb_001288_020--Hb_001005_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.674537 2.91741 2.19071 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0739718 2.65218 0.0822118

CAGE analysis