Hb_001002_090

Information

Type -
Description -
Location Contig1002: 125149-129225
Sequence    

Annotation

kegg
ID rcu:RCOM_0811450
description Interleukin-1 receptor-associated kinase, putative (EC:1.3.1.74)
nr
ID XP_012075793.1
description PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
swissprot
ID Q94C77
description Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1
trembl
ID A0A067LBN5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15451 PE=4 SV=1
Gene Ontology
ID GO:0016021
description receptor protein kinase-like protein at4g34220

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00249: 125532-127443 , PASA_asmbl_00251: 127667-128992
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001002_090 0.0 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
2 Hb_055440_010 0.0739593003 - - protein binding protein, putative [Ricinus communis]
3 Hb_000979_080 0.1023360167 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
4 Hb_000187_110 0.1084350387 - - PREDICTED: serine carboxypeptidase-like 7 [Jatropha curcas]
5 Hb_072997_010 0.1132300814 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
6 Hb_009767_030 0.1221355076 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
7 Hb_001776_070 0.1259543177 - - PREDICTED: glucan endo-1,3-beta-glucosidase isoform X2 [Jatropha curcas]
8 Hb_021888_010 0.1292586996 - - PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Jatropha curcas]
9 Hb_009070_030 0.1305911424 - - PREDICTED: mechanosensitive ion channel protein 10 [Jatropha curcas]
10 Hb_010164_020 0.1334012458 - - PREDICTED: abscisate beta-glucosyltransferase-like [Jatropha curcas]
11 Hb_010598_010 0.1341515222 - - PREDICTED: ankyrin-1-like [Jatropha curcas]
12 Hb_006834_010 0.1357021866 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001158_110 0.1373893065 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
14 Hb_003768_110 0.1374811208 - - hypothetical protein POPTR_0004s12230g [Populus trichocarpa]
15 Hb_008554_090 0.1435932057 - - zinc finger protein, putative [Ricinus communis]
16 Hb_000086_720 0.1444414506 - - leucoanthocyanidin dioxygenase, putative [Ricinus communis]
17 Hb_005730_070 0.1454149351 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 8 [Jatropha curcas]
18 Hb_004984_020 0.146815072 - - PREDICTED: uncharacterized protein LOC105647814 [Jatropha curcas]
19 Hb_000161_230 0.1469141733 - - lactoylglutathione lyase, putative [Ricinus communis]
20 Hb_001288_020 0.1491038135 - - -

Gene co-expression network

sample Hb_001002_090 Hb_001002_090 Hb_055440_010 Hb_055440_010 Hb_001002_090--Hb_055440_010 Hb_000979_080 Hb_000979_080 Hb_001002_090--Hb_000979_080 Hb_000187_110 Hb_000187_110 Hb_001002_090--Hb_000187_110 Hb_072997_010 Hb_072997_010 Hb_001002_090--Hb_072997_010 Hb_009767_030 Hb_009767_030 Hb_001002_090--Hb_009767_030 Hb_001776_070 Hb_001776_070 Hb_001002_090--Hb_001776_070 Hb_055440_010--Hb_072997_010 Hb_004984_020 Hb_004984_020 Hb_055440_010--Hb_004984_020 Hb_006834_010 Hb_006834_010 Hb_055440_010--Hb_006834_010 Hb_004096_010 Hb_004096_010 Hb_055440_010--Hb_004096_010 Hb_055440_010--Hb_000979_080 Hb_000979_080--Hb_000187_110 Hb_003768_100 Hb_003768_100 Hb_000979_080--Hb_003768_100 Hb_003226_050 Hb_003226_050 Hb_000979_080--Hb_003226_050 Hb_001053_110 Hb_001053_110 Hb_000979_080--Hb_001053_110 Hb_000161_230 Hb_000161_230 Hb_000187_110--Hb_000161_230 Hb_000187_110--Hb_003226_050 Hb_000187_110--Hb_055440_010 Hb_001633_120 Hb_001633_120 Hb_000187_110--Hb_001633_120 Hb_072997_010--Hb_004096_010 Hb_010598_010 Hb_010598_010 Hb_072997_010--Hb_010598_010 Hb_072997_010--Hb_009767_030 Hb_001288_020 Hb_001288_020 Hb_072997_010--Hb_001288_020 Hb_000696_250 Hb_000696_250 Hb_009767_030--Hb_000696_250 Hb_001252_050 Hb_001252_050 Hb_009767_030--Hb_001252_050 Hb_009767_030--Hb_001776_070 Hb_021888_010 Hb_021888_010 Hb_009767_030--Hb_021888_010 Hb_010164_020 Hb_010164_020 Hb_001776_070--Hb_010164_020 Hb_000696_030 Hb_000696_030 Hb_001776_070--Hb_000696_030 Hb_027556_060 Hb_027556_060 Hb_001776_070--Hb_027556_060 Hb_005679_110 Hb_005679_110 Hb_001776_070--Hb_005679_110 Hb_001349_020 Hb_001349_020 Hb_001776_070--Hb_001349_020 Hb_005144_080 Hb_005144_080 Hb_001776_070--Hb_005144_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.022596 0.965308 2.97626 2.94844 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.37795 0.198037

CAGE analysis