Hb_001053_110

Information

Type -
Description -
Location Contig1053: 92434-94644
Sequence    

Annotation

kegg
ID tcc:TCM_005884
description Group 2, putative
nr
ID XP_012065561.1
description PREDICTED: uncharacterized protein LOC105628699 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4S2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16758 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001053_110 0.0 - - PREDICTED: uncharacterized protein LOC105628699 [Jatropha curcas]
2 Hb_129637_010 0.085752762 - - PREDICTED: alpha-mannosidase isoform X1 [Populus euphratica]
3 Hb_000300_170 0.0907153062 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]
4 Hb_005489_120 0.0923687648 - - leucine rich repeat receptor kinase, putative [Ricinus communis]
5 Hb_000417_350 0.1015498137 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005333_120 0.1047102022 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
7 Hb_001369_620 0.1065569296 - - PREDICTED: protein EXORDIUM-like 3 [Jatropha curcas]
8 Hb_001470_040 0.1200766379 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]
9 Hb_118707_020 0.1219448621 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002333_010 0.123881586 - - hypothetical protein JCGZ_18834 [Jatropha curcas]
11 Hb_000979_080 0.1250723241 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
12 Hb_004462_040 0.1261322359 - - unnamed protein product [Vitis vinifera]
13 Hb_001963_020 0.1277998568 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
14 Hb_007313_010 0.1296111169 - - hypothetical protein JCGZ_23398 [Jatropha curcas]
15 Hb_000963_010 0.1345141401 - - PREDICTED: aquaporin PIP2-4 [Jatropha curcas]
16 Hb_012787_050 0.1373703523 - - PREDICTED: glutathione S-transferase U18-like [Jatropha curcas]
17 Hb_000022_280 0.1386679806 - - PREDICTED: uncharacterized protein LOC105638282 [Jatropha curcas]
18 Hb_000318_060 0.1387568356 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001568_010 0.1397333065 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003266_060 0.1415330509 - - PREDICTED: basic 7S globulin-like [Populus euphratica]

Gene co-expression network

sample Hb_001053_110 Hb_001053_110 Hb_129637_010 Hb_129637_010 Hb_001053_110--Hb_129637_010 Hb_000300_170 Hb_000300_170 Hb_001053_110--Hb_000300_170 Hb_005489_120 Hb_005489_120 Hb_001053_110--Hb_005489_120 Hb_000417_350 Hb_000417_350 Hb_001053_110--Hb_000417_350 Hb_005333_120 Hb_005333_120 Hb_001053_110--Hb_005333_120 Hb_001369_620 Hb_001369_620 Hb_001053_110--Hb_001369_620 Hb_129637_010--Hb_000417_350 Hb_009711_040 Hb_009711_040 Hb_129637_010--Hb_009711_040 Hb_129637_010--Hb_001369_620 Hb_129637_010--Hb_005333_120 Hb_118707_020 Hb_118707_020 Hb_129637_010--Hb_118707_020 Hb_000022_280 Hb_000022_280 Hb_000300_170--Hb_000022_280 Hb_000300_170--Hb_005489_120 Hb_004129_110 Hb_004129_110 Hb_000300_170--Hb_004129_110 Hb_007313_010 Hb_007313_010 Hb_000300_170--Hb_007313_010 Hb_001856_160 Hb_001856_160 Hb_000300_170--Hb_001856_160 Hb_000676_170 Hb_000676_170 Hb_005489_120--Hb_000676_170 Hb_005489_120--Hb_001856_160 Hb_012787_050 Hb_012787_050 Hb_005489_120--Hb_012787_050 Hb_005489_120--Hb_000022_280 Hb_000417_350--Hb_009711_040 Hb_000417_350--Hb_005333_120 Hb_000306_050 Hb_000306_050 Hb_000417_350--Hb_000306_050 Hb_003171_070 Hb_003171_070 Hb_000417_350--Hb_003171_070 Hb_004462_040 Hb_004462_040 Hb_005333_120--Hb_004462_040 Hb_003435_070 Hb_003435_070 Hb_005333_120--Hb_003435_070 Hb_002333_010 Hb_002333_010 Hb_005333_120--Hb_002333_010 Hb_001856_150 Hb_001856_150 Hb_005333_120--Hb_001856_150 Hb_000003_510 Hb_000003_510 Hb_001369_620--Hb_000003_510 Hb_002016_020 Hb_002016_020 Hb_001369_620--Hb_002016_020 Hb_003734_120 Hb_003734_120 Hb_001369_620--Hb_003734_120 Hb_003805_080 Hb_003805_080 Hb_001369_620--Hb_003805_080 Hb_001963_020 Hb_001963_020 Hb_001369_620--Hb_001963_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0467799 0.731663 0.734418 2.34183 0.0208604 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.2027 0.307402

CAGE analysis