Hb_000003_510

Information

Type -
Description -
Location Contig3: 366768-367346
Sequence    

Annotation

kegg
ID rcu:RCOM_1491190
description hypothetical protein
nr
ID XP_012069100.1
description PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9T5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24873 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000003_510 0.0 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
2 Hb_001963_020 0.0985253361 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
3 Hb_001369_620 0.1001369413 - - PREDICTED: protein EXORDIUM-like 3 [Jatropha curcas]
4 Hb_000276_030 0.1153848527 - - dimethylaniline monooxygenase, putative [Ricinus communis]
5 Hb_001470_040 0.1217485123 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]
6 Hb_002072_020 0.1266076792 - - hypothetical protein JCGZ_16057 [Jatropha curcas]
7 Hb_010174_170 0.1279145045 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Jatropha curcas]
8 Hb_000580_070 0.1353283804 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
9 Hb_003734_120 0.1378694864 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
10 Hb_002016_020 0.1428991755 - - RALFL33, putative [Ricinus communis]
11 Hb_001493_020 0.1486400338 - - leucine-rich repeat receptor-like protein kinase [Manihot esculenta]
12 Hb_000032_560 0.1490658577 - - hypothetical protein JCGZ_15037 [Jatropha curcas]
13 Hb_003787_060 0.1490819555 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
14 Hb_001959_030 0.1494292463 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003805_080 0.1514474846 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
16 Hb_080147_060 0.153527204 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
17 Hb_000487_240 0.1538422463 - - PREDICTED: CYSTM1 family protein B [Cucumis melo]
18 Hb_032050_050 0.1568402807 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
19 Hb_000300_170 0.1572570155 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]
20 Hb_000934_290 0.1586360417 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000003_510 Hb_000003_510 Hb_001963_020 Hb_001963_020 Hb_000003_510--Hb_001963_020 Hb_001369_620 Hb_001369_620 Hb_000003_510--Hb_001369_620 Hb_000276_030 Hb_000276_030 Hb_000003_510--Hb_000276_030 Hb_001470_040 Hb_001470_040 Hb_000003_510--Hb_001470_040 Hb_002072_020 Hb_002072_020 Hb_000003_510--Hb_002072_020 Hb_010174_170 Hb_010174_170 Hb_000003_510--Hb_010174_170 Hb_001963_020--Hb_001470_040 Hb_001963_020--Hb_000276_030 Hb_001963_020--Hb_001369_620 Hb_001053_110 Hb_001053_110 Hb_001963_020--Hb_001053_110 Hb_001963_020--Hb_010174_170 Hb_001369_620--Hb_001053_110 Hb_002016_020 Hb_002016_020 Hb_001369_620--Hb_002016_020 Hb_003734_120 Hb_003734_120 Hb_001369_620--Hb_003734_120 Hb_003805_080 Hb_003805_080 Hb_001369_620--Hb_003805_080 Hb_000487_240 Hb_000487_240 Hb_000276_030--Hb_000487_240 Hb_000276_030--Hb_003734_120 Hb_000276_030--Hb_001470_040 Hb_005211_090 Hb_005211_090 Hb_000276_030--Hb_005211_090 Hb_003787_060 Hb_003787_060 Hb_000276_030--Hb_003787_060 Hb_000934_290 Hb_000934_290 Hb_000276_030--Hb_000934_290 Hb_001514_070 Hb_001514_070 Hb_001470_040--Hb_001514_070 Hb_007313_010 Hb_007313_010 Hb_001470_040--Hb_007313_010 Hb_000963_010 Hb_000963_010 Hb_001470_040--Hb_000963_010 Hb_000393_030 Hb_000393_030 Hb_001470_040--Hb_000393_030 Hb_000976_440 Hb_000976_440 Hb_002072_020--Hb_000976_440 Hb_048476_010 Hb_048476_010 Hb_002072_020--Hb_048476_010 Hb_032050_050 Hb_032050_050 Hb_002072_020--Hb_032050_050 Hb_000077_330 Hb_000077_330 Hb_002072_020--Hb_000077_330 Hb_009823_010 Hb_009823_010 Hb_002072_020--Hb_009823_010 Hb_000022_280 Hb_000022_280 Hb_010174_170--Hb_000022_280 Hb_004129_110 Hb_004129_110 Hb_010174_170--Hb_004129_110 Hb_001723_070 Hb_001723_070 Hb_010174_170--Hb_001723_070 Hb_000009_130 Hb_000009_130 Hb_010174_170--Hb_000009_130 Hb_010519_020 Hb_010519_020 Hb_010174_170--Hb_010519_020 Hb_001221_480 Hb_001221_480 Hb_010174_170--Hb_001221_480
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.116428 0.975877 0.5793 1.34279 0.0430443 0.111521
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.57816 0.322093

CAGE analysis