Hb_000276_030

Information

Type -
Description -
Location Contig276: 117317-122704
Sequence    

Annotation

kegg
ID rcu:RCOM_1627890
description dimethylaniline monooxygenase, putative (EC:1.14.13.8)
nr
ID XP_002527280.1
description dimethylaniline monooxygenase, putative [Ricinus communis]
swissprot
ID Q9LMA1
description Probable flavin-containing monooxygenase 1 OS=Arabidopsis thaliana GN=FMO1 PE=2 SV=1
trembl
ID B9SMR1
description Dimethylaniline monooxygenase, putative OS=Ricinus communis GN=RCOM_1627890 PE=4 SV=1
Gene Ontology
ID GO:0004499
description probable flavin-containing monooxygenase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28885: 117419-122713
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000276_030 0.0 - - dimethylaniline monooxygenase, putative [Ricinus communis]
2 Hb_000487_240 0.0817581335 - - PREDICTED: CYSTM1 family protein B [Cucumis melo]
3 Hb_003734_120 0.0827190977 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
4 Hb_001470_040 0.0853678078 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]
5 Hb_005211_090 0.1006964135 - - PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Jatropha curcas]
6 Hb_003787_060 0.1037776997 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
7 Hb_000934_290 0.1075651939 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001963_020 0.110595532 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
9 Hb_001514_070 0.1106808259 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_003805_080 0.111652002 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
11 Hb_000025_740 0.1126201474 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
12 Hb_000003_510 0.1153848527 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
13 Hb_003090_180 0.1166043585 - - PREDICTED: uncharacterized protein LOC105646674 [Jatropha curcas]
14 Hb_000032_560 0.1210907985 - - hypothetical protein JCGZ_15037 [Jatropha curcas]
15 Hb_000580_070 0.1227950221 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
16 Hb_188923_010 0.122914609 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
17 Hb_001104_210 0.1229147792 - - hypothetical protein JCGZ_23620 [Jatropha curcas]
18 Hb_000852_050 0.1234068126 - - hypothetical protein POPTR_0018s02450g [Populus trichocarpa]
19 Hb_039496_010 0.1238276148 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
20 Hb_010174_170 0.1243708653 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000276_030 Hb_000276_030 Hb_000487_240 Hb_000487_240 Hb_000276_030--Hb_000487_240 Hb_003734_120 Hb_003734_120 Hb_000276_030--Hb_003734_120 Hb_001470_040 Hb_001470_040 Hb_000276_030--Hb_001470_040 Hb_005211_090 Hb_005211_090 Hb_000276_030--Hb_005211_090 Hb_003787_060 Hb_003787_060 Hb_000276_030--Hb_003787_060 Hb_000934_290 Hb_000934_290 Hb_000276_030--Hb_000934_290 Hb_003090_180 Hb_003090_180 Hb_000487_240--Hb_003090_180 Hb_001104_210 Hb_001104_210 Hb_000487_240--Hb_001104_210 Hb_002182_050 Hb_002182_050 Hb_000487_240--Hb_002182_050 Hb_000025_740 Hb_000025_740 Hb_000487_240--Hb_000025_740 Hb_012807_140 Hb_012807_140 Hb_000487_240--Hb_012807_140 Hb_003734_120--Hb_003787_060 Hb_188923_010 Hb_188923_010 Hb_003734_120--Hb_188923_010 Hb_018133_110 Hb_018133_110 Hb_003734_120--Hb_018133_110 Hb_007313_010 Hb_007313_010 Hb_003734_120--Hb_007313_010 Hb_002042_200 Hb_002042_200 Hb_003734_120--Hb_002042_200 Hb_001963_020 Hb_001963_020 Hb_001470_040--Hb_001963_020 Hb_001514_070 Hb_001514_070 Hb_001470_040--Hb_001514_070 Hb_001470_040--Hb_007313_010 Hb_000963_010 Hb_000963_010 Hb_001470_040--Hb_000963_010 Hb_000393_030 Hb_000393_030 Hb_001470_040--Hb_000393_030 Hb_009627_040 Hb_009627_040 Hb_005211_090--Hb_009627_040 Hb_005211_090--Hb_001514_070 Hb_000011_120 Hb_000011_120 Hb_005211_090--Hb_000011_120 Hb_002391_350 Hb_002391_350 Hb_005211_090--Hb_002391_350 Hb_005237_040 Hb_005237_040 Hb_005211_090--Hb_005237_040 Hb_001329_110 Hb_001329_110 Hb_005211_090--Hb_001329_110 Hb_003805_080 Hb_003805_080 Hb_003787_060--Hb_003805_080 Hb_039496_010 Hb_039496_010 Hb_003787_060--Hb_039496_010 Hb_003787_060--Hb_188923_010 Hb_003787_060--Hb_000963_010 Hb_003787_060--Hb_000934_290 Hb_008140_060 Hb_008140_060 Hb_000934_290--Hb_008140_060 Hb_003788_010 Hb_003788_010 Hb_000934_290--Hb_003788_010 Hb_000934_290--Hb_039496_010 Hb_001158_080 Hb_001158_080 Hb_000934_290--Hb_001158_080 Hb_094637_010 Hb_094637_010 Hb_000934_290--Hb_094637_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.18026 9.86367 4.78779 13.1695 0.157358 0.0178454
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0345523 38.8599 3.46542

CAGE analysis