Hb_003734_120

Information

Type -
Description -
Location Contig3734: 117467-118847
Sequence    

Annotation

kegg
ID rcu:RCOM_0517470
description hypothetical protein
nr
ID XP_012070654.1
description PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00700 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38177: 118576-118732
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003734_120 0.0 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
2 Hb_000276_030 0.0827190977 - - dimethylaniline monooxygenase, putative [Ricinus communis]
3 Hb_003787_060 0.1018111835 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
4 Hb_188923_010 0.1104160484 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
5 Hb_018133_110 0.1105814247 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_007313_010 0.1107467767 - - hypothetical protein JCGZ_23398 [Jatropha curcas]
7 Hb_002042_200 0.1118906542 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
8 Hb_001623_400 0.1153429498 - - conserved hypothetical protein [Ricinus communis]
9 Hb_118707_020 0.1177093779 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003805_080 0.1183365752 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
11 Hb_001369_620 0.1204438297 - - PREDICTED: protein EXORDIUM-like 3 [Jatropha curcas]
12 Hb_000487_240 0.1210033644 - - PREDICTED: CYSTM1 family protein B [Cucumis melo]
13 Hb_111147_010 0.1232300229 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000032_560 0.1264095532 - - hypothetical protein JCGZ_15037 [Jatropha curcas]
15 Hb_000025_740 0.1271029271 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
16 Hb_001470_040 0.1297185756 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]
17 Hb_000347_230 0.130141369 - - inter-alpha-trypsin inhibitor heavy chain, putative [Ricinus communis]
18 Hb_000967_010 0.1312025351 - - hypothetical protein JCGZ_08336 [Jatropha curcas]
19 Hb_164283_010 0.1312957729 - - hypothetical protein RCOM_0725500 [Ricinus communis]
20 Hb_006618_080 0.1313519363 - - PREDICTED: non-specific lipid-transfer protein [Jatropha curcas]

Gene co-expression network

sample Hb_003734_120 Hb_003734_120 Hb_000276_030 Hb_000276_030 Hb_003734_120--Hb_000276_030 Hb_003787_060 Hb_003787_060 Hb_003734_120--Hb_003787_060 Hb_188923_010 Hb_188923_010 Hb_003734_120--Hb_188923_010 Hb_018133_110 Hb_018133_110 Hb_003734_120--Hb_018133_110 Hb_007313_010 Hb_007313_010 Hb_003734_120--Hb_007313_010 Hb_002042_200 Hb_002042_200 Hb_003734_120--Hb_002042_200 Hb_000487_240 Hb_000487_240 Hb_000276_030--Hb_000487_240 Hb_001470_040 Hb_001470_040 Hb_000276_030--Hb_001470_040 Hb_005211_090 Hb_005211_090 Hb_000276_030--Hb_005211_090 Hb_000276_030--Hb_003787_060 Hb_000934_290 Hb_000934_290 Hb_000276_030--Hb_000934_290 Hb_003805_080 Hb_003805_080 Hb_003787_060--Hb_003805_080 Hb_039496_010 Hb_039496_010 Hb_003787_060--Hb_039496_010 Hb_003787_060--Hb_188923_010 Hb_000963_010 Hb_000963_010 Hb_003787_060--Hb_000963_010 Hb_003787_060--Hb_000934_290 Hb_000967_010 Hb_000967_010 Hb_188923_010--Hb_000967_010 Hb_188923_010--Hb_003805_080 Hb_003058_180 Hb_003058_180 Hb_188923_010--Hb_003058_180 Hb_001863_080 Hb_001863_080 Hb_188923_010--Hb_001863_080 Hb_118707_020 Hb_118707_020 Hb_188923_010--Hb_118707_020 Hb_000032_560 Hb_000032_560 Hb_018133_110--Hb_000032_560 Hb_000347_230 Hb_000347_230 Hb_018133_110--Hb_000347_230 Hb_018133_110--Hb_002042_200 Hb_000580_070 Hb_000580_070 Hb_018133_110--Hb_000580_070 Hb_002301_420 Hb_002301_420 Hb_018133_110--Hb_002301_420 Hb_000834_210 Hb_000834_210 Hb_007313_010--Hb_000834_210 Hb_000723_240 Hb_000723_240 Hb_007313_010--Hb_000723_240 Hb_003160_050 Hb_003160_050 Hb_007313_010--Hb_003160_050 Hb_003768_100 Hb_003768_100 Hb_007313_010--Hb_003768_100 Hb_001514_070 Hb_001514_070 Hb_007313_010--Hb_001514_070 Hb_001623_400 Hb_001623_400 Hb_002042_200--Hb_001623_400 Hb_000175_480 Hb_000175_480 Hb_002042_200--Hb_000175_480 Hb_027634_010 Hb_027634_010 Hb_002042_200--Hb_027634_010 Hb_017491_040 Hb_017491_040 Hb_002042_200--Hb_017491_040 Hb_001959_030 Hb_001959_030 Hb_002042_200--Hb_001959_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.737373 0.479092 1.35946 0 0.0144856
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.55466 0.184471

CAGE analysis