Hb_000967_010

Information

Type -
Description -
Location Contig967: 4098-7522
Sequence    

Annotation

kegg
ID tcc:TCM_021731
description Major facilitator superfamily protein, putative
nr
ID KDP36569.1
description hypothetical protein JCGZ_08336 [Jatropha curcas]
swissprot
ID P0CI03
description Protein NRT1/ PTR FAMILY 5.6 OS=Arabidopsis thaliana GN=NPF5.6 PE=2 SV=1
trembl
ID A0A067KXJ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08336 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000967_010 0.0 - - hypothetical protein JCGZ_08336 [Jatropha curcas]
2 Hb_118707_020 0.0603248234 - - conserved hypothetical protein [Ricinus communis]
3 Hb_188923_010 0.0655301315 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
4 Hb_008727_030 0.082575984 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003435_070 0.0885382518 - - PREDICTED: probable pectate lyase 12 isoform X3 [Jatropha curcas]
6 Hb_011452_020 0.0971852666 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 4 [Jatropha curcas]
7 Hb_135811_040 0.1032754561 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003058_180 0.1041071631 transcription factor TF Family: HSF hypothetical protein POPTR_0001s28040g [Populus trichocarpa]
9 Hb_000380_210 0.1133923082 - - Cyclic nucleotide-gated channel 15 [Theobroma cacao]
10 Hb_006120_010 0.1158869351 - - invertase inhibitor [Manihot esculenta]
11 Hb_001856_150 0.1206327935 - - -
12 Hb_005333_120 0.1220659068 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
13 Hb_000230_160 0.1226434031 - - PREDICTED: uncharacterized protein LOC105631858 isoform X1 [Jatropha curcas]
14 Hb_001863_080 0.1257365058 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
15 Hb_000077_450 0.1279071923 - - o-methyltransferase, putative [Ricinus communis]
16 Hb_003805_080 0.1283571848 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
17 Hb_003787_060 0.1310485582 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
18 Hb_003734_120 0.1312025351 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
19 Hb_021418_010 0.132747385 - - PREDICTED: probable pectate lyase 12 [Prunus mume]
20 Hb_004462_040 0.1340699011 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_000967_010 Hb_000967_010 Hb_118707_020 Hb_118707_020 Hb_000967_010--Hb_118707_020 Hb_188923_010 Hb_188923_010 Hb_000967_010--Hb_188923_010 Hb_008727_030 Hb_008727_030 Hb_000967_010--Hb_008727_030 Hb_003435_070 Hb_003435_070 Hb_000967_010--Hb_003435_070 Hb_011452_020 Hb_011452_020 Hb_000967_010--Hb_011452_020 Hb_135811_040 Hb_135811_040 Hb_000967_010--Hb_135811_040 Hb_118707_020--Hb_008727_030 Hb_118707_020--Hb_188923_010 Hb_118707_020--Hb_135811_040 Hb_118707_020--Hb_003435_070 Hb_000380_210 Hb_000380_210 Hb_118707_020--Hb_000380_210 Hb_003805_080 Hb_003805_080 Hb_188923_010--Hb_003805_080 Hb_003787_060 Hb_003787_060 Hb_188923_010--Hb_003787_060 Hb_003058_180 Hb_003058_180 Hb_188923_010--Hb_003058_180 Hb_001863_080 Hb_001863_080 Hb_188923_010--Hb_001863_080 Hb_008727_030--Hb_003435_070 Hb_003789_020 Hb_003789_020 Hb_008727_030--Hb_003789_020 Hb_005144_180 Hb_005144_180 Hb_008727_030--Hb_005144_180 Hb_011139_010 Hb_011139_010 Hb_008727_030--Hb_011139_010 Hb_005333_120 Hb_005333_120 Hb_003435_070--Hb_005333_120 Hb_001856_150 Hb_001856_150 Hb_003435_070--Hb_001856_150 Hb_003435_070--Hb_003058_180 Hb_000077_450 Hb_000077_450 Hb_011452_020--Hb_000077_450 Hb_021418_010 Hb_021418_010 Hb_011452_020--Hb_021418_010 Hb_006120_010 Hb_006120_010 Hb_011452_020--Hb_006120_010 Hb_011452_020--Hb_008727_030 Hb_011452_020--Hb_003435_070 Hb_135811_040--Hb_188923_010 Hb_002016_020 Hb_002016_020 Hb_135811_040--Hb_002016_020 Hb_135811_040--Hb_003058_180 Hb_000032_560 Hb_000032_560 Hb_135811_040--Hb_000032_560
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0745442 0.0313619 0.298891 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.527805 0.0378755

CAGE analysis