Hb_006120_010

Information

Type -
Description -
Location Contig6120: 4960-5493
Sequence    

Annotation

kegg
ID rcu:RCOM_1001370
description Pectinesterase inhibitor, putative
nr
ID AJG39412.1
description invertase inhibitor [Manihot esculenta]
swissprot
ID F4HWQ8
description Cell wall / vacuolar inhibitor of fructosidase 1 OS=Arabidopsis thaliana GN=C/VIF1 PE=1 SV=1
trembl
ID A0A0B5KUF3
description Invertase inhibitor OS=Manihot esculenta GN=INH2 PE=2 SV=1
Gene Ontology
ID GO:0004857
description cell wall vacuolar inhibitor of fructosidase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006120_010 0.0 - - invertase inhibitor [Manihot esculenta]
2 Hb_003058_180 0.0668762345 transcription factor TF Family: HSF hypothetical protein POPTR_0001s28040g [Populus trichocarpa]
3 Hb_046191_010 0.0969563388 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_002499_020 0.0998437745 - - hevamine-A precursor, putative [Ricinus communis]
5 Hb_000230_160 0.1071010871 - - PREDICTED: uncharacterized protein LOC105631858 isoform X1 [Jatropha curcas]
6 Hb_000077_450 0.1108949208 - - o-methyltransferase, putative [Ricinus communis]
7 Hb_188923_010 0.1113685675 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
8 Hb_011452_020 0.1119544888 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 4 [Jatropha curcas]
9 Hb_000487_140 0.1133362721 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
10 Hb_014115_010 0.1149490252 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_000967_010 0.1158869351 - - hypothetical protein JCGZ_08336 [Jatropha curcas]
12 Hb_010571_010 0.1181984666 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
13 Hb_022181_010 0.1237920231 - - PREDICTED: peroxidase 19 [Jatropha curcas]
14 Hb_000081_030 0.1256222536 - - BnaC09g05810D [Brassica napus]
15 Hb_021418_010 0.127960495 - - PREDICTED: probable pectate lyase 12 [Prunus mume]
16 Hb_001856_150 0.128521976 - - -
17 Hb_000761_030 0.1368024367 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
18 Hb_003469_030 0.1372938742 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
19 Hb_116478_010 0.138050373 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF003-like [Jatropha curcas]
20 Hb_003435_070 0.139729585 - - PREDICTED: probable pectate lyase 12 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_006120_010 Hb_006120_010 Hb_003058_180 Hb_003058_180 Hb_006120_010--Hb_003058_180 Hb_046191_010 Hb_046191_010 Hb_006120_010--Hb_046191_010 Hb_002499_020 Hb_002499_020 Hb_006120_010--Hb_002499_020 Hb_000230_160 Hb_000230_160 Hb_006120_010--Hb_000230_160 Hb_000077_450 Hb_000077_450 Hb_006120_010--Hb_000077_450 Hb_188923_010 Hb_188923_010 Hb_006120_010--Hb_188923_010 Hb_003058_180--Hb_000230_160 Hb_003058_180--Hb_188923_010 Hb_001856_150 Hb_001856_150 Hb_003058_180--Hb_001856_150 Hb_003805_080 Hb_003805_080 Hb_003058_180--Hb_003805_080 Hb_000487_140 Hb_000487_140 Hb_003058_180--Hb_000487_140 Hb_014115_010 Hb_014115_010 Hb_046191_010--Hb_014115_010 Hb_046191_010--Hb_002499_020 Hb_010571_010 Hb_010571_010 Hb_046191_010--Hb_010571_010 Hb_003469_030 Hb_003469_030 Hb_046191_010--Hb_003469_030 Hb_005056_030 Hb_005056_030 Hb_046191_010--Hb_005056_030 Hb_002499_020--Hb_010571_010 Hb_002499_020--Hb_005056_030 Hb_002499_020--Hb_003469_030 Hb_002499_020--Hb_014115_010 Hb_000081_030 Hb_000081_030 Hb_000230_160--Hb_000081_030 Hb_000230_160--Hb_001856_150 Hb_000286_030 Hb_000286_030 Hb_000230_160--Hb_000286_030 Hb_028008_030 Hb_028008_030 Hb_000230_160--Hb_028008_030 Hb_006314_020 Hb_006314_020 Hb_000230_160--Hb_006314_020 Hb_011452_020 Hb_011452_020 Hb_000077_450--Hb_011452_020 Hb_021418_010 Hb_021418_010 Hb_000077_450--Hb_021418_010 Hb_000967_010 Hb_000967_010 Hb_000077_450--Hb_000967_010 Hb_000077_450--Hb_010571_010 Hb_000077_450--Hb_003058_180 Hb_188923_010--Hb_000967_010 Hb_188923_010--Hb_003805_080 Hb_003787_060 Hb_003787_060 Hb_188923_010--Hb_003787_060 Hb_001863_080 Hb_001863_080 Hb_188923_010--Hb_001863_080 Hb_118707_020 Hb_118707_020 Hb_188923_010--Hb_118707_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.338929 12.5246 1.03029 36.2768 0.0486348 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 69.6359 1.61807

CAGE analysis