Hb_003469_030

Information

Type -
Description -
Location Contig3469: 43988-47287
Sequence    

Annotation

kegg
ID fve:101299142
description LRR receptor-like serine/threonine-protein kinase EFR-like
nr
ID KDP44807.1
description hypothetical protein JCGZ_01307 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067L8U0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01307 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003469_030 0.0 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
2 Hb_046191_010 0.0837281476 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_010571_010 0.0911205562 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
4 Hb_095532_010 0.0932323598 - - BnaC05g27570D [Brassica napus]
5 Hb_002499_020 0.1123581134 - - hevamine-A precursor, putative [Ricinus communis]
6 Hb_014115_010 0.11743343 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_001522_050 0.119431849 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Jatropha curcas]
8 Hb_148817_010 0.133825355 - - PREDICTED: CASP-like protein 1D1 [Jatropha curcas]
9 Hb_005056_030 0.1360971096 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
10 Hb_006120_010 0.1372938742 - - invertase inhibitor [Manihot esculenta]
11 Hb_000676_380 0.144379693 - - cytochrome P450 family protein [Populus trichocarpa]
12 Hb_000077_450 0.1446687599 - - o-methyltransferase, putative [Ricinus communis]
13 Hb_020805_110 0.1471598901 - - PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Jatropha curcas]
14 Hb_001596_030 0.1492811356 - - PREDICTED: uncharacterized protein LOC105141672 [Populus euphratica]
15 Hb_021418_010 0.149525105 - - PREDICTED: probable pectate lyase 12 [Prunus mume]
16 Hb_007181_080 0.1538760427 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
17 Hb_081282_010 0.1540702362 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
18 Hb_000081_030 0.1567218643 - - BnaC09g05810D [Brassica napus]
19 Hb_000306_050 0.1578627917 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
20 Hb_003090_230 0.1594070011 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003469_030 Hb_003469_030 Hb_046191_010 Hb_046191_010 Hb_003469_030--Hb_046191_010 Hb_010571_010 Hb_010571_010 Hb_003469_030--Hb_010571_010 Hb_095532_010 Hb_095532_010 Hb_003469_030--Hb_095532_010 Hb_002499_020 Hb_002499_020 Hb_003469_030--Hb_002499_020 Hb_014115_010 Hb_014115_010 Hb_003469_030--Hb_014115_010 Hb_001522_050 Hb_001522_050 Hb_003469_030--Hb_001522_050 Hb_046191_010--Hb_014115_010 Hb_046191_010--Hb_002499_020 Hb_046191_010--Hb_010571_010 Hb_005056_030 Hb_005056_030 Hb_046191_010--Hb_005056_030 Hb_006120_010 Hb_006120_010 Hb_046191_010--Hb_006120_010 Hb_010571_010--Hb_002499_020 Hb_010571_010--Hb_006120_010 Hb_007181_080 Hb_007181_080 Hb_010571_010--Hb_007181_080 Hb_010571_010--Hb_005056_030 Hb_148817_010 Hb_148817_010 Hb_095532_010--Hb_148817_010 Hb_000032_330 Hb_000032_330 Hb_095532_010--Hb_000032_330 Hb_161981_010 Hb_161981_010 Hb_095532_010--Hb_161981_010 Hb_000521_350 Hb_000521_350 Hb_095532_010--Hb_000521_350 Hb_000670_080 Hb_000670_080 Hb_095532_010--Hb_000670_080 Hb_002499_020--Hb_006120_010 Hb_002499_020--Hb_005056_030 Hb_002499_020--Hb_014115_010 Hb_000306_050 Hb_000306_050 Hb_014115_010--Hb_000306_050 Hb_014115_010--Hb_005056_030 Hb_000081_030 Hb_000081_030 Hb_014115_010--Hb_000081_030 Hb_000761_030 Hb_000761_030 Hb_014115_010--Hb_000761_030 Hb_014115_010--Hb_006120_010 Hb_020805_110 Hb_020805_110 Hb_001522_050--Hb_020805_110 Hb_003090_230 Hb_003090_230 Hb_001522_050--Hb_003090_230 Hb_022181_010 Hb_022181_010 Hb_001522_050--Hb_022181_010 Hb_000676_380 Hb_000676_380 Hb_001522_050--Hb_000676_380 Hb_001522_050--Hb_000670_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00537848 0 0.0271908 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0370035 0

CAGE analysis