Hb_005056_030

Information

Type -
Description -
Location Contig5056: 13352-14089
Sequence    

Annotation

kegg
ID rcu:RCOM_0366110
description DUF26 domain-containing protein 2 precursor, putative
nr
ID XP_002533571.1
description DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
swissprot
ID Q9LRJ9
description Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1
trembl
ID B9T5Q2
description DUF26 domain-containing protein 2, putative OS=Ricinus communis GN=RCOM_0366110 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005056_030 0.0 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
2 Hb_006268_010 0.0800608378 - - hypothetical protein EUGRSUZ_B00966 [Eucalyptus grandis]
3 Hb_002622_020 0.0854087126 - - -
4 Hb_012762_070 0.0920906246 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
5 Hb_046191_010 0.0940819757 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_000761_030 0.097065652 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
7 Hb_000472_030 0.0976079738 - - -
8 Hb_014115_010 0.1034296327 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_002499_020 0.1121094645 - - hevamine-A precursor, putative [Ricinus communis]
10 Hb_007850_040 0.1135215145 - - conserved hypothetical protein [Ricinus communis]
11 Hb_086122_030 0.1215430487 - - D-glycerate 3-kinase, chloroplast precursor, putative [Ricinus communis]
12 Hb_161981_010 0.1221274199 - - brassinosteroid insensitive 1 -like protein [Gossypium arboreum]
13 Hb_000155_270 0.1225490767 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
14 Hb_010571_010 0.1260274771 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
15 Hb_003469_030 0.1360971096 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
16 Hb_000608_080 0.1362859344 - - hypothetical protein JCGZ_22216 [Jatropha curcas]
17 Hb_000081_030 0.1371265834 - - BnaC09g05810D [Brassica napus]
18 Hb_000487_140 0.1438801717 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
19 Hb_006120_010 0.1443321207 - - invertase inhibitor [Manihot esculenta]
20 Hb_060272_010 0.1496167603 - - PREDICTED: gibberellin 20 oxidase 2 [Populus euphratica]

Gene co-expression network

sample Hb_005056_030 Hb_005056_030 Hb_006268_010 Hb_006268_010 Hb_005056_030--Hb_006268_010 Hb_002622_020 Hb_002622_020 Hb_005056_030--Hb_002622_020 Hb_012762_070 Hb_012762_070 Hb_005056_030--Hb_012762_070 Hb_046191_010 Hb_046191_010 Hb_005056_030--Hb_046191_010 Hb_000761_030 Hb_000761_030 Hb_005056_030--Hb_000761_030 Hb_000472_030 Hb_000472_030 Hb_005056_030--Hb_000472_030 Hb_007850_040 Hb_007850_040 Hb_006268_010--Hb_007850_040 Hb_000155_270 Hb_000155_270 Hb_006268_010--Hb_000155_270 Hb_006268_010--Hb_002622_020 Hb_086122_030 Hb_086122_030 Hb_006268_010--Hb_086122_030 Hb_060272_010 Hb_060272_010 Hb_006268_010--Hb_060272_010 Hb_002622_020--Hb_000472_030 Hb_002622_020--Hb_012762_070 Hb_002622_020--Hb_007850_040 Hb_000608_080 Hb_000608_080 Hb_002622_020--Hb_000608_080 Hb_012762_070--Hb_000472_030 Hb_012762_070--Hb_000608_080 Hb_166813_010 Hb_166813_010 Hb_012762_070--Hb_166813_010 Hb_012762_070--Hb_006268_010 Hb_014115_010 Hb_014115_010 Hb_046191_010--Hb_014115_010 Hb_002499_020 Hb_002499_020 Hb_046191_010--Hb_002499_020 Hb_010571_010 Hb_010571_010 Hb_046191_010--Hb_010571_010 Hb_003469_030 Hb_003469_030 Hb_046191_010--Hb_003469_030 Hb_006120_010 Hb_006120_010 Hb_046191_010--Hb_006120_010 Hb_000081_030 Hb_000081_030 Hb_000761_030--Hb_000081_030 Hb_000761_030--Hb_006268_010 Hb_000230_160 Hb_000230_160 Hb_000761_030--Hb_000230_160 Hb_000487_140 Hb_000487_140 Hb_000761_030--Hb_000487_140 Hb_000761_030--Hb_014115_010 Hb_000472_030--Hb_000608_080 Hb_000334_250 Hb_000334_250 Hb_000472_030--Hb_000334_250 Hb_009515_010 Hb_009515_010 Hb_000472_030--Hb_009515_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0330449 0 0.0567942 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0960372 0

CAGE analysis