Hb_006268_010

Information

Type -
Description -
Location Contig6268: 9874-10465
Sequence    

Annotation

kegg
ID egr:104446739
description uncharacterized LOC104446739
nr
ID KCW84083.1
description hypothetical protein EUGRSUZ_B00966 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059D025
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00966 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006268_010 0.0 - - hypothetical protein EUGRSUZ_B00966 [Eucalyptus grandis]
2 Hb_007850_040 0.0392506481 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000155_270 0.0518162111 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
4 Hb_005056_030 0.0800608378 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
5 Hb_002622_020 0.0883557393 - - -
6 Hb_086122_030 0.0887617946 - - D-glycerate 3-kinase, chloroplast precursor, putative [Ricinus communis]
7 Hb_060272_010 0.0915526081 - - PREDICTED: gibberellin 20 oxidase 2 [Populus euphratica]
8 Hb_000761_030 0.1012709667 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
9 Hb_000472_030 0.1017253349 - - -
10 Hb_161981_010 0.1046077572 - - brassinosteroid insensitive 1 -like protein [Gossypium arboreum]
11 Hb_001157_130 0.10961119 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
12 Hb_012762_070 0.1169039152 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
13 Hb_002282_030 0.124437324 - - -
14 Hb_000891_060 0.1246099939 - - hypothetical protein JCGZ_11234 [Jatropha curcas]
15 Hb_000616_060 0.1249847931 - - -
16 Hb_000575_010 0.1265699539 - - PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
17 Hb_014115_010 0.1478919278 - - UDP-glucosyltransferase, putative [Ricinus communis]
18 Hb_009543_040 0.1513522057 - - -
19 Hb_006395_010 0.1520105903 - - hypothetical protein RCOM_0725500 [Ricinus communis]
20 Hb_000081_030 0.1524709677 - - BnaC09g05810D [Brassica napus]

Gene co-expression network

sample Hb_006268_010 Hb_006268_010 Hb_007850_040 Hb_007850_040 Hb_006268_010--Hb_007850_040 Hb_000155_270 Hb_000155_270 Hb_006268_010--Hb_000155_270 Hb_005056_030 Hb_005056_030 Hb_006268_010--Hb_005056_030 Hb_002622_020 Hb_002622_020 Hb_006268_010--Hb_002622_020 Hb_086122_030 Hb_086122_030 Hb_006268_010--Hb_086122_030 Hb_060272_010 Hb_060272_010 Hb_006268_010--Hb_060272_010 Hb_007850_040--Hb_000155_270 Hb_007850_040--Hb_002622_020 Hb_002282_030 Hb_002282_030 Hb_007850_040--Hb_002282_030 Hb_000891_060 Hb_000891_060 Hb_007850_040--Hb_000891_060 Hb_000472_030 Hb_000472_030 Hb_007850_040--Hb_000472_030 Hb_000155_270--Hb_060272_010 Hb_001157_130 Hb_001157_130 Hb_000155_270--Hb_001157_130 Hb_000155_270--Hb_086122_030 Hb_161981_010 Hb_161981_010 Hb_000155_270--Hb_161981_010 Hb_005056_030--Hb_002622_020 Hb_012762_070 Hb_012762_070 Hb_005056_030--Hb_012762_070 Hb_046191_010 Hb_046191_010 Hb_005056_030--Hb_046191_010 Hb_000761_030 Hb_000761_030 Hb_005056_030--Hb_000761_030 Hb_005056_030--Hb_000472_030 Hb_002622_020--Hb_000472_030 Hb_002622_020--Hb_012762_070 Hb_000608_080 Hb_000608_080 Hb_002622_020--Hb_000608_080 Hb_086122_030--Hb_161981_010 Hb_086122_030--Hb_060272_010 Hb_000521_350 Hb_000521_350 Hb_086122_030--Hb_000521_350 Hb_086122_030--Hb_001157_130 Hb_060272_010--Hb_001157_130 Hb_060272_010--Hb_161981_010 Hb_017866_010 Hb_017866_010 Hb_060272_010--Hb_017866_010 Hb_132438_010 Hb_132438_010 Hb_060272_010--Hb_132438_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0466875 0 0.0600367 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.083057 0

CAGE analysis