Hb_012762_070

Information

Type transcription factor
Description TF Family: HB
Location Contig12762: 64506-67446
Sequence    

Annotation

kegg
ID tcc:TCM_010868
description Homeobox-leucine zipper protein HOX3
nr
ID XP_012072213.1
description PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
swissprot
ID Q0JKX1
description Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1
trembl
ID A0A067L0M8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04693 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox-leucine zipper protein hox3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012762_070 0.0 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
2 Hb_002622_020 0.0622990962 - - -
3 Hb_000472_030 0.0637686251 - - -
4 Hb_005056_030 0.0920906246 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
5 Hb_000608_080 0.0954814624 - - hypothetical protein JCGZ_22216 [Jatropha curcas]
6 Hb_166813_010 0.1029322828 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
7 Hb_006268_010 0.1169039152 - - hypothetical protein EUGRSUZ_B00966 [Eucalyptus grandis]
8 Hb_000761_030 0.1245445015 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
9 Hb_009515_010 0.1260588236 transcription factor TF Family: HB hypothetical protein JCGZ_15302 [Jatropha curcas]
10 Hb_000487_140 0.1261196667 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
11 Hb_007850_040 0.1271255993 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000141_230 0.1276139254 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Camelina sativa]
13 Hb_004544_080 0.1281247559 - - lectin protein kinase [Populus trichocarpa]
14 Hb_003462_150 0.1308464485 - - PREDICTED: chitinase 1-like [Eucalyptus grandis]
15 Hb_014115_010 0.133230538 - - UDP-glucosyltransferase, putative [Ricinus communis]
16 Hb_001638_110 0.1333346063 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000334_250 0.1334690989 - - Polygalacturonase precursor, putative [Ricinus communis]
18 Hb_046191_010 0.1342994969 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_005228_170 0.1361401508 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
20 Hb_000302_060 0.1408915991 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_012762_070 Hb_012762_070 Hb_002622_020 Hb_002622_020 Hb_012762_070--Hb_002622_020 Hb_000472_030 Hb_000472_030 Hb_012762_070--Hb_000472_030 Hb_005056_030 Hb_005056_030 Hb_012762_070--Hb_005056_030 Hb_000608_080 Hb_000608_080 Hb_012762_070--Hb_000608_080 Hb_166813_010 Hb_166813_010 Hb_012762_070--Hb_166813_010 Hb_006268_010 Hb_006268_010 Hb_012762_070--Hb_006268_010 Hb_002622_020--Hb_000472_030 Hb_002622_020--Hb_005056_030 Hb_002622_020--Hb_006268_010 Hb_007850_040 Hb_007850_040 Hb_002622_020--Hb_007850_040 Hb_002622_020--Hb_000608_080 Hb_000472_030--Hb_000608_080 Hb_000472_030--Hb_005056_030 Hb_000334_250 Hb_000334_250 Hb_000472_030--Hb_000334_250 Hb_009515_010 Hb_009515_010 Hb_000472_030--Hb_009515_010 Hb_005056_030--Hb_006268_010 Hb_046191_010 Hb_046191_010 Hb_005056_030--Hb_046191_010 Hb_000761_030 Hb_000761_030 Hb_005056_030--Hb_000761_030 Hb_000141_230 Hb_000141_230 Hb_000608_080--Hb_000141_230 Hb_004544_080 Hb_004544_080 Hb_000608_080--Hb_004544_080 Hb_003462_150 Hb_003462_150 Hb_000608_080--Hb_003462_150 Hb_000302_060 Hb_000302_060 Hb_000608_080--Hb_000302_060 Hb_000608_080--Hb_009515_010 Hb_002999_090 Hb_002999_090 Hb_000608_080--Hb_002999_090 Hb_002475_020 Hb_002475_020 Hb_166813_010--Hb_002475_020 Hb_000948_070 Hb_000948_070 Hb_166813_010--Hb_000948_070 Hb_166813_010--Hb_000608_080 Hb_166813_010--Hb_000141_230 Hb_166813_010--Hb_004544_080 Hb_000238_060 Hb_000238_060 Hb_166813_010--Hb_000238_060 Hb_006268_010--Hb_007850_040 Hb_000155_270 Hb_000155_270 Hb_006268_010--Hb_000155_270 Hb_086122_030 Hb_086122_030 Hb_006268_010--Hb_086122_030 Hb_060272_010 Hb_060272_010 Hb_006268_010--Hb_060272_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.845146 0.0238828 0.911243 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.19258 0

CAGE analysis