Hb_166813_010

Information

Type -
Description -
Location Contig166813: 91-1067
Sequence    

Annotation

kegg
ID cic:CICLE_v10026662mg
description hypothetical protein
nr
ID KDP40971.1
description hypothetical protein JCGZ_24970 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXM6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24970 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_166813_010 0.0 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
2 Hb_002475_020 0.0882331322 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Populus euphratica]
3 Hb_000948_070 0.0957466029 - - hypothetical protein POPTR_0016s01720g [Populus trichocarpa]
4 Hb_000608_080 0.0984733804 - - hypothetical protein JCGZ_22216 [Jatropha curcas]
5 Hb_000141_230 0.1013911503 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Camelina sativa]
6 Hb_004544_080 0.1014520742 - - lectin protein kinase [Populus trichocarpa]
7 Hb_000238_060 0.1016035504 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
8 Hb_003462_150 0.1020439742 - - PREDICTED: chitinase 1-like [Eucalyptus grandis]
9 Hb_012762_070 0.1029322828 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
10 Hb_005218_070 0.1053707197 transcription factor TF Family: MYB PREDICTED: transcription factor RAX3 isoform X2 [Populus euphratica]
11 Hb_005228_170 0.105406446 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
12 Hb_164162_020 0.1069791688 - - PREDICTED: uncharacterized protein LOC105646964 [Jatropha curcas]
13 Hb_001971_070 0.1086049788 - - unnamed protein product [Coffea canephora]
14 Hb_002671_110 0.1126771001 - - PREDICTED: remorin-like [Jatropha curcas]
15 Hb_001405_100 0.1187670528 - - PREDICTED: lysM domain receptor-like kinase 4 [Jatropha curcas]
16 Hb_000081_020 0.1188468367 - - PREDICTED: protein NRT1/ PTR FAMILY 1.1-like [Camelina sativa]
17 Hb_000567_310 0.1199192998 - - Miraculin precursor, putative [Ricinus communis]
18 Hb_000302_060 0.1204590182 - - unnamed protein product [Vitis vinifera]
19 Hb_000539_080 0.1224982041 - - hypothetical protein POPTR_0039s00260g, partial [Populus trichocarpa]
20 Hb_001901_010 0.1252069497 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]

Gene co-expression network

sample Hb_166813_010 Hb_166813_010 Hb_002475_020 Hb_002475_020 Hb_166813_010--Hb_002475_020 Hb_000948_070 Hb_000948_070 Hb_166813_010--Hb_000948_070 Hb_000608_080 Hb_000608_080 Hb_166813_010--Hb_000608_080 Hb_000141_230 Hb_000141_230 Hb_166813_010--Hb_000141_230 Hb_004544_080 Hb_004544_080 Hb_166813_010--Hb_004544_080 Hb_000238_060 Hb_000238_060 Hb_166813_010--Hb_000238_060 Hb_002556_020 Hb_002556_020 Hb_002475_020--Hb_002556_020 Hb_002475_020--Hb_000141_230 Hb_002999_090 Hb_002999_090 Hb_002475_020--Hb_002999_090 Hb_000302_060 Hb_000302_060 Hb_002475_020--Hb_000302_060 Hb_003462_150 Hb_003462_150 Hb_002475_020--Hb_003462_150 Hb_002475_020--Hb_004544_080 Hb_000539_080 Hb_000539_080 Hb_000948_070--Hb_000539_080 Hb_000567_310 Hb_000567_310 Hb_000948_070--Hb_000567_310 Hb_164162_020 Hb_164162_020 Hb_000948_070--Hb_164162_020 Hb_002900_070 Hb_002900_070 Hb_000948_070--Hb_002900_070 Hb_006538_050 Hb_006538_050 Hb_000948_070--Hb_006538_050 Hb_076895_020 Hb_076895_020 Hb_000948_070--Hb_076895_020 Hb_000608_080--Hb_000141_230 Hb_000608_080--Hb_004544_080 Hb_000608_080--Hb_003462_150 Hb_000608_080--Hb_000302_060 Hb_009515_010 Hb_009515_010 Hb_000608_080--Hb_009515_010 Hb_000608_080--Hb_002999_090 Hb_000141_230--Hb_003462_150 Hb_000141_230--Hb_004544_080 Hb_000141_230--Hb_000302_060 Hb_000141_230--Hb_002999_090 Hb_000141_230--Hb_002556_020 Hb_004544_080--Hb_003462_150 Hb_004544_080--Hb_002999_090 Hb_004544_080--Hb_002556_020 Hb_001405_100 Hb_001405_100 Hb_000238_060--Hb_001405_100 Hb_000237_150 Hb_000237_150 Hb_000238_060--Hb_000237_150 Hb_000852_050 Hb_000852_050 Hb_000238_060--Hb_000852_050 Hb_002671_110 Hb_002671_110 Hb_000238_060--Hb_002671_110 Hb_000081_020 Hb_000081_020 Hb_000238_060--Hb_000081_020 Hb_005228_170 Hb_005228_170 Hb_000238_060--Hb_005228_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.11113 0.121074 1.04091 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.11517 0

CAGE analysis