Hb_017866_010

Information

Type -
Description -
Location Contig17866: 11424-14725
Sequence    

Annotation

kegg
ID pop:POPTR_0013s03980g
description POPTRDRAFT_571054; kinase family protein
nr
ID XP_002319081.1
description kinase family protein [Populus trichocarpa]
swissprot
ID Q9SR05
description Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1
trembl
ID B9I5G8
description Kinase family protein OS=Populus trichocarpa GN=POPTR_0013s03980g PE=3 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase anxur2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017866_010 0.0 - - kinase family protein [Populus trichocarpa]
2 Hb_112011_010 0.0312893818 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
3 Hb_132438_010 0.0472027036 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
4 Hb_000751_210 0.0489641039 - - PREDICTED: petal death protein isoform X2 [Jatropha curcas]
5 Hb_000658_020 0.052920777 - - PREDICTED: UDP-glucuronate 4-epimerase 1 [Musa acuminata subsp. malaccensis]
6 Hb_105446_010 0.0541584585 - - -
7 Hb_004724_010 0.0559454471 - - -
8 Hb_001157_130 0.0660283742 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
9 Hb_009543_040 0.0701407787 - - -
10 Hb_060272_010 0.0783374855 - - PREDICTED: gibberellin 20 oxidase 2 [Populus euphratica]
11 Hb_012879_010 0.1019622472 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000575_010 0.1063427558 - - PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
13 Hb_000616_060 0.1093605439 - - -
14 Hb_086122_030 0.1106549915 - - D-glycerate 3-kinase, chloroplast precursor, putative [Ricinus communis]
15 Hb_000891_060 0.11425053 - - hypothetical protein JCGZ_11234 [Jatropha curcas]
16 Hb_000155_270 0.116876148 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
17 Hb_002282_030 0.1223148265 - - -
18 Hb_161981_010 0.1234197567 - - brassinosteroid insensitive 1 -like protein [Gossypium arboreum]
19 Hb_062226_080 0.1268346653 - - -
20 Hb_005888_040 0.1269978474 - - PREDICTED: gibberellin 20 oxidase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_017866_010 Hb_017866_010 Hb_112011_010 Hb_112011_010 Hb_017866_010--Hb_112011_010 Hb_132438_010 Hb_132438_010 Hb_017866_010--Hb_132438_010 Hb_000751_210 Hb_000751_210 Hb_017866_010--Hb_000751_210 Hb_000658_020 Hb_000658_020 Hb_017866_010--Hb_000658_020 Hb_105446_010 Hb_105446_010 Hb_017866_010--Hb_105446_010 Hb_004724_010 Hb_004724_010 Hb_017866_010--Hb_004724_010 Hb_112011_010--Hb_000658_020 Hb_112011_010--Hb_004724_010 Hb_112011_010--Hb_105446_010 Hb_112011_010--Hb_000751_210 Hb_112011_010--Hb_132438_010 Hb_132438_010--Hb_000751_210 Hb_009543_040 Hb_009543_040 Hb_132438_010--Hb_009543_040 Hb_001157_130 Hb_001157_130 Hb_132438_010--Hb_001157_130 Hb_132438_010--Hb_105446_010 Hb_000575_010 Hb_000575_010 Hb_132438_010--Hb_000575_010 Hb_000751_210--Hb_009543_040 Hb_000751_210--Hb_105446_010 Hb_000751_210--Hb_001157_130 Hb_000658_020--Hb_004724_010 Hb_000658_020--Hb_105446_010 Hb_000658_020--Hb_000751_210 Hb_012879_010 Hb_012879_010 Hb_000658_020--Hb_012879_010 Hb_105446_010--Hb_004724_010 Hb_004724_010--Hb_000751_210 Hb_004724_010--Hb_012879_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0735936 0 0.129084 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0709546 0

CAGE analysis