Hb_000230_160

Information

Type -
Description -
Location Contig230: 206085-212017
Sequence    

Annotation

kegg
ID rcu:RCOM_0679090
description inosine-uridine preferring nucleoside hydrolase, putative
nr
ID XP_012069448.1
description PREDICTED: uncharacterized protein LOC105631858 isoform X1 [Jatropha curcas]
swissprot
ID Q6LQG2
description Pyrimidine-specific ribonucleoside hydrolase RihA OS=Photobacterium profundum GN=rihA PE=3 SV=1
trembl
ID A0A067KV70
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02050 PE=4 SV=1
Gene Ontology
ID GO:0016787
description inosine-uridine preferring nucleoside

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24003: 210716-211042
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000230_160 0.0 - - PREDICTED: uncharacterized protein LOC105631858 isoform X1 [Jatropha curcas]
2 Hb_003058_180 0.0598821339 transcription factor TF Family: HSF hypothetical protein POPTR_0001s28040g [Populus trichocarpa]
3 Hb_000081_030 0.0727014683 - - BnaC09g05810D [Brassica napus]
4 Hb_001856_150 0.0745275889 - - -
5 Hb_000286_030 0.0840332411 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
6 Hb_028008_030 0.0858425329 - - probable xyloglucan endotransglucosylase/hydrolase protein 23 precursor [Malus domestica]
7 Hb_006314_020 0.0917728015 - - PREDICTED: GABA transporter 1-like [Jatropha curcas]
8 Hb_003805_080 0.0931851989 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
9 Hb_188923_010 0.1060982616 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
10 Hb_006120_010 0.1071010871 - - invertase inhibitor [Manihot esculenta]
11 Hb_003435_070 0.1108817126 - - PREDICTED: probable pectate lyase 12 isoform X3 [Jatropha curcas]
12 Hb_000761_030 0.1116506715 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
13 Hb_000172_740 0.1146073545 - - HXXXD-type acyl-transferase family protein, putative [Theobroma cacao]
14 Hb_005333_120 0.1157160739 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
15 Hb_003967_010 0.1185978444 - - cytochrome P450, putative [Ricinus communis]
16 Hb_000487_140 0.1196735456 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
17 Hb_014115_010 0.1225790777 - - UDP-glucosyltransferase, putative [Ricinus communis]
18 Hb_000967_010 0.1226434031 - - hypothetical protein JCGZ_08336 [Jatropha curcas]
19 Hb_001998_260 0.1255736778 - - cytochrome P450, putative [Ricinus communis]
20 Hb_001863_080 0.1286188671 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]

Gene co-expression network

sample Hb_000230_160 Hb_000230_160 Hb_003058_180 Hb_003058_180 Hb_000230_160--Hb_003058_180 Hb_000081_030 Hb_000081_030 Hb_000230_160--Hb_000081_030 Hb_001856_150 Hb_001856_150 Hb_000230_160--Hb_001856_150 Hb_000286_030 Hb_000286_030 Hb_000230_160--Hb_000286_030 Hb_028008_030 Hb_028008_030 Hb_000230_160--Hb_028008_030 Hb_006314_020 Hb_006314_020 Hb_000230_160--Hb_006314_020 Hb_006120_010 Hb_006120_010 Hb_003058_180--Hb_006120_010 Hb_188923_010 Hb_188923_010 Hb_003058_180--Hb_188923_010 Hb_003058_180--Hb_001856_150 Hb_003805_080 Hb_003805_080 Hb_003058_180--Hb_003805_080 Hb_000487_140 Hb_000487_140 Hb_003058_180--Hb_000487_140 Hb_000081_030--Hb_000286_030 Hb_000761_030 Hb_000761_030 Hb_000081_030--Hb_000761_030 Hb_148817_010 Hb_148817_010 Hb_000081_030--Hb_148817_010 Hb_000081_030--Hb_001856_150 Hb_000081_030--Hb_006314_020 Hb_001856_150--Hb_006314_020 Hb_003435_070 Hb_003435_070 Hb_001856_150--Hb_003435_070 Hb_003171_070 Hb_003171_070 Hb_001856_150--Hb_003171_070 Hb_004875_040 Hb_004875_040 Hb_001856_150--Hb_004875_040 Hb_000172_740 Hb_000172_740 Hb_000286_030--Hb_000172_740 Hb_000286_030--Hb_001856_150 Hb_000286_030--Hb_006314_020 Hb_001863_080 Hb_001863_080 Hb_000286_030--Hb_001863_080 Hb_028008_030--Hb_003805_080 Hb_001799_090 Hb_001799_090 Hb_028008_030--Hb_001799_090 Hb_001998_260 Hb_001998_260 Hb_028008_030--Hb_001998_260 Hb_039496_010 Hb_039496_010 Hb_028008_030--Hb_039496_010 Hb_003967_010 Hb_003967_010 Hb_028008_030--Hb_003967_010 Hb_003371_040 Hb_003371_040 Hb_006314_020--Hb_003371_040 Hb_006314_020--Hb_003171_070 Hb_006314_020--Hb_148817_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.017064 1.0745 0.14671 2.7049 0.00645199 0.00642354
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.5108 0.183542

CAGE analysis