Hb_000172_740

Information

Type -
Description -
Location Contig172: 770996-774298
Sequence    

Annotation

kegg
ID tcc:TCM_027608
description HXXXD-type acyl-transferase family protein, putative
nr
ID XP_007023568.1
description HXXXD-type acyl-transferase family protein, putative [Theobroma cacao]
swissprot
ID Q94CD1
description Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1
trembl
ID A0A061G8N7
description HXXXD-type acyl-transferase family protein, putative OS=Theobroma cacao GN=TCM_027608 PE=4 SV=1
Gene Ontology
ID GO:0047672
description shikimate o-hydroxycinnamoyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000172_740 0.0 - - HXXXD-type acyl-transferase family protein, putative [Theobroma cacao]
2 Hb_001863_080 0.0714608281 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
3 Hb_150084_010 0.0939520266 - - PREDICTED: premnaspirodiene oxygenase-like [Vitis vinifera]
4 Hb_000286_030 0.0959107114 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
5 Hb_188923_010 0.1095049087 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
6 Hb_003805_080 0.1137866409 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
7 Hb_000230_160 0.1146073545 - - PREDICTED: uncharacterized protein LOC105631858 isoform X1 [Jatropha curcas]
8 Hb_003435_070 0.1155392385 - - PREDICTED: probable pectate lyase 12 isoform X3 [Jatropha curcas]
9 Hb_003058_180 0.1209992567 transcription factor TF Family: HSF hypothetical protein POPTR_0001s28040g [Populus trichocarpa]
10 Hb_000963_010 0.1212671427 - - PREDICTED: aquaporin PIP2-4 [Jatropha curcas]
11 Hb_184942_010 0.121601554 - - STS14 protein precursor, putative [Ricinus communis]
12 Hb_003787_060 0.1232015419 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
13 Hb_002333_010 0.1304923174 - - hypothetical protein JCGZ_18834 [Jatropha curcas]
14 Hb_001158_080 0.1305517553 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
15 Hb_028008_030 0.1326460509 - - probable xyloglucan endotransglucosylase/hydrolase protein 23 precursor [Malus domestica]
16 Hb_000487_140 0.1372810114 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
17 Hb_055529_010 0.1375167094 transcription factor TF Family: ERF Ethylene-responsive transcription factor 1B, putative [Ricinus communis]
18 Hb_005333_120 0.1383118769 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
19 Hb_000967_010 0.1383258203 - - hypothetical protein JCGZ_08336 [Jatropha curcas]
20 Hb_039496_010 0.1385975576 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]

Gene co-expression network

sample Hb_000172_740 Hb_000172_740 Hb_001863_080 Hb_001863_080 Hb_000172_740--Hb_001863_080 Hb_150084_010 Hb_150084_010 Hb_000172_740--Hb_150084_010 Hb_000286_030 Hb_000286_030 Hb_000172_740--Hb_000286_030 Hb_188923_010 Hb_188923_010 Hb_000172_740--Hb_188923_010 Hb_003805_080 Hb_003805_080 Hb_000172_740--Hb_003805_080 Hb_000230_160 Hb_000230_160 Hb_000172_740--Hb_000230_160 Hb_001863_080--Hb_188923_010 Hb_001863_080--Hb_000286_030 Hb_003058_180 Hb_003058_180 Hb_001863_080--Hb_003058_180 Hb_001863_080--Hb_150084_010 Hb_000487_140 Hb_000487_140 Hb_001863_080--Hb_000487_140 Hb_002333_010 Hb_002333_010 Hb_150084_010--Hb_002333_010 Hb_000963_010 Hb_000963_010 Hb_150084_010--Hb_000963_010 Hb_184942_010 Hb_184942_010 Hb_150084_010--Hb_184942_010 Hb_172633_020 Hb_172633_020 Hb_150084_010--Hb_172633_020 Hb_002042_160 Hb_002042_160 Hb_150084_010--Hb_002042_160 Hb_000081_030 Hb_000081_030 Hb_000286_030--Hb_000081_030 Hb_000286_030--Hb_000230_160 Hb_001856_150 Hb_001856_150 Hb_000286_030--Hb_001856_150 Hb_006314_020 Hb_006314_020 Hb_000286_030--Hb_006314_020 Hb_000967_010 Hb_000967_010 Hb_188923_010--Hb_000967_010 Hb_188923_010--Hb_003805_080 Hb_003787_060 Hb_003787_060 Hb_188923_010--Hb_003787_060 Hb_188923_010--Hb_003058_180 Hb_118707_020 Hb_118707_020 Hb_188923_010--Hb_118707_020 Hb_003805_080--Hb_003787_060 Hb_028008_030 Hb_028008_030 Hb_003805_080--Hb_028008_030 Hb_039496_010 Hb_039496_010 Hb_003805_080--Hb_039496_010 Hb_003805_080--Hb_000230_160 Hb_003805_080--Hb_003058_180 Hb_000230_160--Hb_003058_180 Hb_000230_160--Hb_000081_030 Hb_000230_160--Hb_001856_150 Hb_000230_160--Hb_028008_030 Hb_000230_160--Hb_006314_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0125263 3.0697 0.275693 6.64493 0.0234595 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0422724 9.78662 1.60083

CAGE analysis