Hb_000077_450

Information

Type -
Description -
Location Contig77: 333458-334774
Sequence    

Annotation

kegg
ID rcu:RCOM_1175840
description o-methyltransferase, putative (EC:2.1.1.146)
nr
ID XP_002517957.1
description o-methyltransferase, putative [Ricinus communis]
swissprot
ID Q6WUC2
description (R,S)-reticuline 7-O-methyltransferase OS=Papaver somniferum GN=PSOMT1 PE=1 SV=1
trembl
ID B9RW38
description O-methyltransferase, putative OS=Ricinus communis GN=RCOM_1175840 PE=4 SV=1
Gene Ontology
ID GO:0016206
description o-methyltransferase omt2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57631: 334074-334653
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000077_450 0.0 - - o-methyltransferase, putative [Ricinus communis]
2 Hb_011452_020 0.0415772069 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 4 [Jatropha curcas]
3 Hb_021418_010 0.0986083302 - - PREDICTED: probable pectate lyase 12 [Prunus mume]
4 Hb_006120_010 0.1108949208 - - invertase inhibitor [Manihot esculenta]
5 Hb_000967_010 0.1279071923 - - hypothetical protein JCGZ_08336 [Jatropha curcas]
6 Hb_010571_010 0.1323241801 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
7 Hb_003058_180 0.143150817 transcription factor TF Family: HSF hypothetical protein POPTR_0001s28040g [Populus trichocarpa]
8 Hb_008727_030 0.1444062532 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003469_030 0.1446687599 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
10 Hb_002499_020 0.1460757061 - - hevamine-A precursor, putative [Ricinus communis]
11 Hb_000676_380 0.1466166119 - - cytochrome P450 family protein [Populus trichocarpa]
12 Hb_001148_050 0.1503483703 - - -
13 Hb_005144_180 0.1508692049 - - PREDICTED: protein enabled homolog [Populus euphratica]
14 Hb_022181_010 0.1517430244 - - PREDICTED: peroxidase 19 [Jatropha curcas]
15 Hb_003090_230 0.1521940945 - - conserved hypothetical protein [Ricinus communis]
16 Hb_046191_010 0.153233651 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_003435_070 0.1543224807 - - PREDICTED: probable pectate lyase 12 isoform X3 [Jatropha curcas]
18 Hb_007181_080 0.1547293931 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
19 Hb_081282_010 0.1548468027 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
20 Hb_011139_010 0.1576772102 - - o-methyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000077_450 Hb_000077_450 Hb_011452_020 Hb_011452_020 Hb_000077_450--Hb_011452_020 Hb_021418_010 Hb_021418_010 Hb_000077_450--Hb_021418_010 Hb_006120_010 Hb_006120_010 Hb_000077_450--Hb_006120_010 Hb_000967_010 Hb_000967_010 Hb_000077_450--Hb_000967_010 Hb_010571_010 Hb_010571_010 Hb_000077_450--Hb_010571_010 Hb_003058_180 Hb_003058_180 Hb_000077_450--Hb_003058_180 Hb_011452_020--Hb_000967_010 Hb_011452_020--Hb_021418_010 Hb_011452_020--Hb_006120_010 Hb_008727_030 Hb_008727_030 Hb_011452_020--Hb_008727_030 Hb_003435_070 Hb_003435_070 Hb_011452_020--Hb_003435_070 Hb_081282_010 Hb_081282_010 Hb_021418_010--Hb_081282_010 Hb_001596_030 Hb_001596_030 Hb_021418_010--Hb_001596_030 Hb_007181_080 Hb_007181_080 Hb_021418_010--Hb_007181_080 Hb_003090_230 Hb_003090_230 Hb_021418_010--Hb_003090_230 Hb_006120_010--Hb_003058_180 Hb_046191_010 Hb_046191_010 Hb_006120_010--Hb_046191_010 Hb_002499_020 Hb_002499_020 Hb_006120_010--Hb_002499_020 Hb_000230_160 Hb_000230_160 Hb_006120_010--Hb_000230_160 Hb_188923_010 Hb_188923_010 Hb_006120_010--Hb_188923_010 Hb_118707_020 Hb_118707_020 Hb_000967_010--Hb_118707_020 Hb_000967_010--Hb_188923_010 Hb_000967_010--Hb_008727_030 Hb_000967_010--Hb_003435_070 Hb_135811_040 Hb_135811_040 Hb_000967_010--Hb_135811_040 Hb_010571_010--Hb_002499_020 Hb_010571_010--Hb_046191_010 Hb_003469_030 Hb_003469_030 Hb_010571_010--Hb_003469_030 Hb_010571_010--Hb_006120_010 Hb_010571_010--Hb_007181_080 Hb_005056_030 Hb_005056_030 Hb_010571_010--Hb_005056_030 Hb_003058_180--Hb_000230_160 Hb_003058_180--Hb_188923_010 Hb_001856_150 Hb_001856_150 Hb_003058_180--Hb_001856_150 Hb_003805_080 Hb_003805_080 Hb_003058_180--Hb_003805_080 Hb_000487_140 Hb_000487_140 Hb_003058_180--Hb_000487_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.775946 0.0492857 5.306 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 10.3926 0.383828

CAGE analysis