Hb_081282_010

Information

Type -
Description -
Location Contig81282: 2-434
Sequence    

Annotation

kegg
ID mdm:103451343
description sugar transporter ERD6-like 5
nr
ID XP_012089451.1
description PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
swissprot
ID Q9LTP6
description Putative sugar transporter ERD6-like 13 OS=Arabidopsis thaliana GN=At3g20460 PE=3 SV=2
trembl
ID M5VY17
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004943mg PE=3 SV=1
Gene Ontology
ID GO:0016021
description sugar transporter erd6-like 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081282_010 0.0 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
2 Hb_001596_030 0.0932752959 - - PREDICTED: uncharacterized protein LOC105141672 [Populus euphratica]
3 Hb_021418_010 0.1017450391 - - PREDICTED: probable pectate lyase 12 [Prunus mume]
4 Hb_003090_230 0.1349345286 - - conserved hypothetical protein [Ricinus communis]
5 Hb_161346_010 0.1358681707 - - PREDICTED: germin-like protein subfamily 1 member 20 [Populus euphratica]
6 Hb_000676_380 0.1363594705 - - cytochrome P450 family protein [Populus trichocarpa]
7 Hb_000540_030 0.1368350171 - - Chitinase 1 precursor, putative [Ricinus communis]
8 Hb_001522_050 0.1376001043 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Jatropha curcas]
9 Hb_003789_020 0.1377813342 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
10 Hb_005656_110 0.1393878176 - - cytochrome P450, putative [Ricinus communis]
11 Hb_000248_090 0.1396128832 - - PREDICTED: uncharacterized protein LOC104110417 [Nicotiana tomentosiformis]
12 Hb_131029_010 0.1399029616 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
13 Hb_003938_220 0.1402829446 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
14 Hb_004607_010 0.1442347918 - - -
15 Hb_002903_030 0.1457070457 - - polyphenol oxidase [Cydonia oblonga]
16 Hb_182831_020 0.147228207 - - multidrug resistance pump, putative [Ricinus communis]
17 Hb_186115_010 0.1490859271 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
18 Hb_146361_020 0.1496622401 - - PREDICTED: germin-like protein subfamily 1 member 11 [Jatropha curcas]
19 Hb_003469_030 0.1540702362 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
20 Hb_001357_370 0.1544749017 - - -

Gene co-expression network

sample Hb_081282_010 Hb_081282_010 Hb_001596_030 Hb_001596_030 Hb_081282_010--Hb_001596_030 Hb_021418_010 Hb_021418_010 Hb_081282_010--Hb_021418_010 Hb_003090_230 Hb_003090_230 Hb_081282_010--Hb_003090_230 Hb_161346_010 Hb_161346_010 Hb_081282_010--Hb_161346_010 Hb_000676_380 Hb_000676_380 Hb_081282_010--Hb_000676_380 Hb_000540_030 Hb_000540_030 Hb_081282_010--Hb_000540_030 Hb_000306_050 Hb_000306_050 Hb_001596_030--Hb_000306_050 Hb_001596_030--Hb_021418_010 Hb_001242_020 Hb_001242_020 Hb_001596_030--Hb_001242_020 Hb_001596_030--Hb_000540_030 Hb_020805_110 Hb_020805_110 Hb_001596_030--Hb_020805_110 Hb_000077_450 Hb_000077_450 Hb_021418_010--Hb_000077_450 Hb_011452_020 Hb_011452_020 Hb_021418_010--Hb_011452_020 Hb_007181_080 Hb_007181_080 Hb_021418_010--Hb_007181_080 Hb_021418_010--Hb_003090_230 Hb_003090_230--Hb_000676_380 Hb_003090_230--Hb_020805_110 Hb_009711_040 Hb_009711_040 Hb_003090_230--Hb_009711_040 Hb_004875_040 Hb_004875_040 Hb_003090_230--Hb_004875_040 Hb_003090_230--Hb_001596_030 Hb_182831_020 Hb_182831_020 Hb_161346_010--Hb_182831_020 Hb_003171_070 Hb_003171_070 Hb_161346_010--Hb_003171_070 Hb_131029_010 Hb_131029_010 Hb_161346_010--Hb_131029_010 Hb_161346_010--Hb_000676_380 Hb_002413_030 Hb_002413_030 Hb_161346_010--Hb_002413_030 Hb_003789_020 Hb_003789_020 Hb_161346_010--Hb_003789_020 Hb_000676_380--Hb_020805_110 Hb_000676_380--Hb_003171_070 Hb_001856_150 Hb_001856_150 Hb_000676_380--Hb_001856_150 Hb_000676_380--Hb_004875_040 Hb_000676_380--Hb_009711_040 Hb_000540_030--Hb_001242_020 Hb_002301_420 Hb_002301_420 Hb_000540_030--Hb_002301_420 Hb_098030_010 Hb_098030_010 Hb_000540_030--Hb_098030_010 Hb_000540_030--Hb_021418_010 Hb_012368_080 Hb_012368_080 Hb_000540_030--Hb_012368_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.253265 0.255943 5.19685 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 7.58505 0

CAGE analysis