Hb_000032_560

Information

Type -
Description -
Location Contig32: 423704-424699
Sequence    

Annotation

kegg
ID rcu:RCOM_1211520
description A/G-specific adenine glycosylase muty, putative
nr
ID KDP45172.1
description hypothetical protein JCGZ_15037 [Jatropha curcas]
swissprot
ID Q5NUF4
description 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza echinata GN=HIDM PE=1 SV=1
trembl
ID A0A067L9T3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15037 PE=4 SV=1
Gene Ontology
ID GO:0016787
description a g-specific adenine glycosylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33767: 423803-424483
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_560 0.0 - - hypothetical protein JCGZ_15037 [Jatropha curcas]
2 Hb_018133_110 0.072754146 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
3 Hb_000580_070 0.0820116318 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
4 Hb_118707_020 0.1074583657 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002597_010 0.1120032125 - - PREDICTED: putative disease resistance protein RGA1 [Malus domestica]
6 Hb_135811_040 0.1201021589 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000276_030 0.1210907985 - - dimethylaniline monooxygenase, putative [Ricinus communis]
8 Hb_002182_050 0.1211671039 - - hypothetical protein CICLE_v10022654mg [Citrus clementina]
9 Hb_002016_020 0.1215073037 - - RALFL33, putative [Ricinus communis]
10 Hb_000380_210 0.1224001687 - - Cyclic nucleotide-gated channel 15 [Theobroma cacao]
11 Hb_000347_230 0.1235249467 - - inter-alpha-trypsin inhibitor heavy chain, putative [Ricinus communis]
12 Hb_001470_040 0.1252790745 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]
13 Hb_006637_040 0.1254500524 - - phenylalanine ammonia-lyase 2 [Manihot esculenta]
14 Hb_003734_120 0.1264095532 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
15 Hb_000005_230 0.12814678 - - hypothetical protein POPTR_0009s01160g [Populus trichocarpa]
16 Hb_001758_120 0.1321453284 - - unnamed protein product [Vitis vinifera]
17 Hb_116478_010 0.1321612965 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF003-like [Jatropha curcas]
18 Hb_000487_240 0.1333398825 - - PREDICTED: CYSTM1 family protein B [Cucumis melo]
19 Hb_001369_620 0.1342857605 - - PREDICTED: protein EXORDIUM-like 3 [Jatropha curcas]
20 Hb_188923_010 0.1369387474 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]

Gene co-expression network

sample Hb_000032_560 Hb_000032_560 Hb_018133_110 Hb_018133_110 Hb_000032_560--Hb_018133_110 Hb_000580_070 Hb_000580_070 Hb_000032_560--Hb_000580_070 Hb_118707_020 Hb_118707_020 Hb_000032_560--Hb_118707_020 Hb_002597_010 Hb_002597_010 Hb_000032_560--Hb_002597_010 Hb_135811_040 Hb_135811_040 Hb_000032_560--Hb_135811_040 Hb_000276_030 Hb_000276_030 Hb_000032_560--Hb_000276_030 Hb_000347_230 Hb_000347_230 Hb_018133_110--Hb_000347_230 Hb_002042_200 Hb_002042_200 Hb_018133_110--Hb_002042_200 Hb_018133_110--Hb_000580_070 Hb_002301_420 Hb_002301_420 Hb_018133_110--Hb_002301_420 Hb_003734_120 Hb_003734_120 Hb_018133_110--Hb_003734_120 Hb_002749_070 Hb_002749_070 Hb_000580_070--Hb_002749_070 Hb_000487_240 Hb_000487_240 Hb_000580_070--Hb_000487_240 Hb_000025_740 Hb_000025_740 Hb_000580_070--Hb_000025_740 Hb_032050_050 Hb_032050_050 Hb_000580_070--Hb_032050_050 Hb_000967_010 Hb_000967_010 Hb_118707_020--Hb_000967_010 Hb_008727_030 Hb_008727_030 Hb_118707_020--Hb_008727_030 Hb_188923_010 Hb_188923_010 Hb_118707_020--Hb_188923_010 Hb_118707_020--Hb_135811_040 Hb_003435_070 Hb_003435_070 Hb_118707_020--Hb_003435_070 Hb_000380_210 Hb_000380_210 Hb_118707_020--Hb_000380_210 Hb_000005_230 Hb_000005_230 Hb_002597_010--Hb_000005_230 Hb_002016_020 Hb_002016_020 Hb_002597_010--Hb_002016_020 Hb_080147_060 Hb_080147_060 Hb_002597_010--Hb_080147_060 Hb_002597_010--Hb_000347_230 Hb_002597_010--Hb_018133_110 Hb_135811_040--Hb_000967_010 Hb_135811_040--Hb_188923_010 Hb_135811_040--Hb_002016_020 Hb_003058_180 Hb_003058_180 Hb_135811_040--Hb_003058_180 Hb_000276_030--Hb_000487_240 Hb_000276_030--Hb_003734_120 Hb_001470_040 Hb_001470_040 Hb_000276_030--Hb_001470_040 Hb_005211_090 Hb_005211_090 Hb_000276_030--Hb_005211_090 Hb_003787_060 Hb_003787_060 Hb_000276_030--Hb_003787_060 Hb_000934_290 Hb_000934_290 Hb_000276_030--Hb_000934_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.227966 2.94056 1.75612 7.85348 0.105674 0.0983955
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.15279 0.20028 0.073709 20.5079 1.5565

CAGE analysis