Hb_001514_070

Information

Type -
Description -
Location Contig1514: 60134-62623
Sequence    

Annotation

kegg
ID rcu:RCOM_1588780
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.18)
nr
ID XP_002510151.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID P17801
description Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2
trembl
ID B9R758
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_1588780 PE=3 SV=1
Gene Ontology
ID GO:0004674
description receptor protein kinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001514_070 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000393_030 0.0761761147 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_002870_010 0.0820821337 - - PREDICTED: uncharacterized protein LOC105649339 [Jatropha curcas]
4 Hb_005211_090 0.0829463166 - - PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Jatropha curcas]
5 Hb_001470_040 0.0991340093 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]
6 Hb_001329_110 0.1029777092 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
7 Hb_000963_010 0.1075482795 - - PREDICTED: aquaporin PIP2-4 [Jatropha curcas]
8 Hb_007313_010 0.1081675145 - - hypothetical protein JCGZ_23398 [Jatropha curcas]
9 Hb_001377_010 0.1091544478 - - PREDICTED: transcription factor TRY-like [Jatropha curcas]
10 Hb_000011_120 0.1093594071 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
11 Hb_000276_030 0.1106808259 - - dimethylaniline monooxygenase, putative [Ricinus communis]
12 Hb_004010_090 0.1131185605 - - ATP binding protein, putative [Ricinus communis]
13 Hb_150084_010 0.1190746556 - - PREDICTED: premnaspirodiene oxygenase-like [Vitis vinifera]
14 Hb_000834_210 0.1193434773 - - unnamed protein product [Vitis vinifera]
15 Hb_004128_090 0.1199942177 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
16 Hb_000112_050 0.120618601 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
17 Hb_002333_010 0.1227156306 - - hypothetical protein JCGZ_18834 [Jatropha curcas]
18 Hb_002490_090 0.1254209146 - - PREDICTED: uncharacterized protein LOC105133003 [Populus euphratica]
19 Hb_184942_010 0.1277453093 - - STS14 protein precursor, putative [Ricinus communis]
20 Hb_002475_030 0.1280105139 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001514_070 Hb_001514_070 Hb_000393_030 Hb_000393_030 Hb_001514_070--Hb_000393_030 Hb_002870_010 Hb_002870_010 Hb_001514_070--Hb_002870_010 Hb_005211_090 Hb_005211_090 Hb_001514_070--Hb_005211_090 Hb_001470_040 Hb_001470_040 Hb_001514_070--Hb_001470_040 Hb_001329_110 Hb_001329_110 Hb_001514_070--Hb_001329_110 Hb_000963_010 Hb_000963_010 Hb_001514_070--Hb_000963_010 Hb_000139_500 Hb_000139_500 Hb_000393_030--Hb_000139_500 Hb_000318_060 Hb_000318_060 Hb_000393_030--Hb_000318_060 Hb_002333_010 Hb_002333_010 Hb_000393_030--Hb_002333_010 Hb_000393_030--Hb_002870_010 Hb_003398_090 Hb_003398_090 Hb_000393_030--Hb_003398_090 Hb_001377_010 Hb_001377_010 Hb_002870_010--Hb_001377_010 Hb_001136_030 Hb_001136_030 Hb_002870_010--Hb_001136_030 Hb_001104_210 Hb_001104_210 Hb_002870_010--Hb_001104_210 Hb_012807_140 Hb_012807_140 Hb_002870_010--Hb_012807_140 Hb_003090_180 Hb_003090_180 Hb_002870_010--Hb_003090_180 Hb_009627_040 Hb_009627_040 Hb_005211_090--Hb_009627_040 Hb_000011_120 Hb_000011_120 Hb_005211_090--Hb_000011_120 Hb_002391_350 Hb_002391_350 Hb_005211_090--Hb_002391_350 Hb_005237_040 Hb_005237_040 Hb_005211_090--Hb_005237_040 Hb_005211_090--Hb_001329_110 Hb_001963_020 Hb_001963_020 Hb_001470_040--Hb_001963_020 Hb_000276_030 Hb_000276_030 Hb_001470_040--Hb_000276_030 Hb_007313_010 Hb_007313_010 Hb_001470_040--Hb_007313_010 Hb_001470_040--Hb_000963_010 Hb_001470_040--Hb_000393_030 Hb_175758_010 Hb_175758_010 Hb_001329_110--Hb_175758_010 Hb_001329_110--Hb_000011_120 Hb_001318_120 Hb_001318_120 Hb_001329_110--Hb_001318_120 Hb_000840_050 Hb_000840_050 Hb_001329_110--Hb_000840_050 Hb_010519_020 Hb_010519_020 Hb_001329_110--Hb_010519_020 Hb_001421_010 Hb_001421_010 Hb_001329_110--Hb_001421_010 Hb_150084_010 Hb_150084_010 Hb_000963_010--Hb_150084_010 Hb_000963_010--Hb_002333_010 Hb_003787_060 Hb_003787_060 Hb_000963_010--Hb_003787_060 Hb_184942_010 Hb_184942_010 Hb_000963_010--Hb_184942_010 Hb_039496_010 Hb_039496_010 Hb_000963_010--Hb_039496_010 Hb_012787_050 Hb_012787_050 Hb_000963_010--Hb_012787_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 10.3862 6.76502 17.5252 0.0307993 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0177455 0.0139637 0 45.4871 9.70493

CAGE analysis