Hb_009823_010

Information

Type -
Description -
Location Contig9823: 7211-17255
Sequence    

Annotation

kegg
ID pop:POPTR_0001s37560g
description POPTRDRAFT_707661; hypothetical protein
nr
ID XP_012071020.1
description PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L466
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01037 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64441: 17011-17507
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009823_010 0.0 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
2 Hb_000976_440 0.0906234609 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_003576_050 0.0930151831 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
4 Hb_001408_050 0.0959443417 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000181_160 0.1123756862 - - PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
6 Hb_000638_090 0.1196264339 - - ABC transporter family protein [Hevea brasiliensis]
7 Hb_000098_310 0.1197832124 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
8 Hb_001248_030 0.1310094303 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_004657_040 0.1429748322 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
10 Hb_000077_330 0.1433894544 - - PREDICTED: bifunctional epoxide hydrolase 2-like [Jatropha curcas]
11 Hb_001678_030 0.1507317612 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
12 Hb_000762_070 0.1510154969 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
13 Hb_001021_030 0.1523125477 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
14 Hb_002662_090 0.1560113391 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
15 Hb_002072_020 0.1597996036 - - hypothetical protein JCGZ_16057 [Jatropha curcas]
16 Hb_007416_150 0.1608719275 - - sarcosine oxidase, putative [Ricinus communis]
17 Hb_003453_030 0.1609221138 - - hypothetical protein JCGZ_26893 [Jatropha curcas]
18 Hb_002304_140 0.1621294077 - - ring finger protein, putative [Ricinus communis]
19 Hb_000915_070 0.1635573065 - - ATP binding protein, putative [Ricinus communis]
20 Hb_117168_010 0.1666464304 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]

Gene co-expression network

sample Hb_009823_010 Hb_009823_010 Hb_000976_440 Hb_000976_440 Hb_009823_010--Hb_000976_440 Hb_003576_050 Hb_003576_050 Hb_009823_010--Hb_003576_050 Hb_001408_050 Hb_001408_050 Hb_009823_010--Hb_001408_050 Hb_000181_160 Hb_000181_160 Hb_009823_010--Hb_000181_160 Hb_000638_090 Hb_000638_090 Hb_009823_010--Hb_000638_090 Hb_000098_310 Hb_000098_310 Hb_009823_010--Hb_000098_310 Hb_000976_440--Hb_001408_050 Hb_000762_070 Hb_000762_070 Hb_000976_440--Hb_000762_070 Hb_002072_020 Hb_002072_020 Hb_000976_440--Hb_002072_020 Hb_000976_440--Hb_003576_050 Hb_001678_030 Hb_001678_030 Hb_000976_440--Hb_001678_030 Hb_003517_020 Hb_003517_020 Hb_003576_050--Hb_003517_020 Hb_003576_050--Hb_001408_050 Hb_000313_370 Hb_000313_370 Hb_003576_050--Hb_000313_370 Hb_001248_030 Hb_001248_030 Hb_003576_050--Hb_001248_030 Hb_000928_040 Hb_000928_040 Hb_003576_050--Hb_000928_040 Hb_003453_030 Hb_003453_030 Hb_001408_050--Hb_003453_030 Hb_001408_050--Hb_000181_160 Hb_001408_050--Hb_001678_030 Hb_001408_050--Hb_000638_090 Hb_004657_040 Hb_004657_040 Hb_000181_160--Hb_004657_040 Hb_001454_410 Hb_001454_410 Hb_000181_160--Hb_001454_410 Hb_001221_480 Hb_001221_480 Hb_000181_160--Hb_001221_480 Hb_000181_160--Hb_000098_310 Hb_000638_090--Hb_001248_030 Hb_000638_090--Hb_003576_050 Hb_004218_160 Hb_004218_160 Hb_000638_090--Hb_004218_160 Hb_117168_010 Hb_117168_010 Hb_000638_090--Hb_117168_010 Hb_011200_020 Hb_011200_020 Hb_000098_310--Hb_011200_020 Hb_000098_310--Hb_003576_050 Hb_000098_310--Hb_001408_050 Hb_031042_030 Hb_031042_030 Hb_000098_310--Hb_031042_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.642222 6.61279 1.61874 3.53882 0.568632 0.801958
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.499645 0.30562 0.319833 14.0548 0.888287

CAGE analysis