Hb_031042_030

Information

Type -
Description -
Location Contig31042: 13557-16726
Sequence    

Annotation

kegg
ID tcc:TCM_015959
description Mtn21-like protein
nr
ID XP_012069987.1
description PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
swissprot
ID Q9FGL0
description WAT1-related protein At5g47470 OS=Arabidopsis thaliana GN=At5g47470 PE=3 SV=1
trembl
ID A0A067KUJ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03407 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wat1-related protein at5g47470

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32850: 13751-16757
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031042_030 0.0 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
2 Hb_001024_030 0.1225716081 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]
3 Hb_002686_390 0.129923254 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
4 Hb_011063_060 0.1329544784 - - PREDICTED: endochitinase-like [Jatropha curcas]
5 Hb_000230_230 0.1351798193 - - hydrolase, putative [Ricinus communis]
6 Hb_011200_020 0.1367894092 - - aldo-keto reductase, putative [Ricinus communis]
7 Hb_000254_040 0.1395184021 - - PREDICTED: uncharacterized protein LOC105634992 [Jatropha curcas]
8 Hb_000077_330 0.1402331189 - - PREDICTED: bifunctional epoxide hydrolase 2-like [Jatropha curcas]
9 Hb_032050_050 0.140318861 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
10 Hb_000010_200 0.1434227153 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
11 Hb_006788_150 0.1460049597 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000098_310 0.1500382916 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
13 Hb_002272_230 0.1505902107 - - sodium/hydrogen exchanger, putative [Ricinus communis]
14 Hb_002200_060 0.1516791449 - - PREDICTED: pleckstrin homology domain-containing family A member 8 [Jatropha curcas]
15 Hb_000181_160 0.153596985 - - PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
16 Hb_012553_020 0.1544492511 - - hypothetical protein JCGZ_09282 [Jatropha curcas]
17 Hb_025526_080 0.1553001451 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Vitis vinifera]
18 Hb_004657_040 0.156142062 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
19 Hb_001660_040 0.1592446053 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
20 Hb_006711_020 0.159916429 - - hypothetical protein JCGZ_07258 [Jatropha curcas]

Gene co-expression network

sample Hb_031042_030 Hb_031042_030 Hb_001024_030 Hb_001024_030 Hb_031042_030--Hb_001024_030 Hb_002686_390 Hb_002686_390 Hb_031042_030--Hb_002686_390 Hb_011063_060 Hb_011063_060 Hb_031042_030--Hb_011063_060 Hb_000230_230 Hb_000230_230 Hb_031042_030--Hb_000230_230 Hb_011200_020 Hb_011200_020 Hb_031042_030--Hb_011200_020 Hb_000254_040 Hb_000254_040 Hb_031042_030--Hb_000254_040 Hb_001024_030--Hb_000254_040 Hb_001024_030--Hb_002686_390 Hb_001024_030--Hb_011200_020 Hb_002200_060 Hb_002200_060 Hb_001024_030--Hb_002200_060 Hb_001024_030--Hb_011063_060 Hb_000010_200 Hb_000010_200 Hb_002686_390--Hb_000010_200 Hb_002686_390--Hb_000254_040 Hb_006711_020 Hb_006711_020 Hb_002686_390--Hb_006711_020 Hb_006949_030 Hb_006949_030 Hb_002686_390--Hb_006949_030 Hb_004884_200 Hb_004884_200 Hb_002686_390--Hb_004884_200 Hb_001514_210 Hb_001514_210 Hb_002686_390--Hb_001514_210 Hb_001660_040 Hb_001660_040 Hb_011063_060--Hb_001660_040 Hb_008225_080 Hb_008225_080 Hb_011063_060--Hb_008225_080 Hb_010334_040 Hb_010334_040 Hb_011063_060--Hb_010334_040 Hb_000288_140 Hb_000288_140 Hb_011063_060--Hb_000288_140 Hb_000025_740 Hb_000025_740 Hb_011063_060--Hb_000025_740 Hb_005010_040 Hb_005010_040 Hb_011063_060--Hb_005010_040 Hb_001104_200 Hb_001104_200 Hb_000230_230--Hb_001104_200 Hb_025526_010 Hb_025526_010 Hb_000230_230--Hb_025526_010 Hb_006788_150 Hb_006788_150 Hb_000230_230--Hb_006788_150 Hb_008768_010 Hb_008768_010 Hb_000230_230--Hb_008768_010 Hb_000580_070 Hb_000580_070 Hb_000230_230--Hb_000580_070 Hb_000098_310 Hb_000098_310 Hb_011200_020--Hb_000098_310 Hb_001504_220 Hb_001504_220 Hb_011200_020--Hb_001504_220 Hb_032225_040 Hb_032225_040 Hb_011200_020--Hb_032225_040 Hb_032631_050 Hb_032631_050 Hb_011200_020--Hb_032631_050 Hb_000421_270 Hb_000421_270 Hb_011200_020--Hb_000421_270 Hb_000254_040--Hb_006949_030 Hb_001331_040 Hb_001331_040 Hb_000254_040--Hb_001331_040 Hb_000254_040--Hb_000010_200 Hb_001013_040 Hb_001013_040 Hb_000254_040--Hb_001013_040 Hb_000381_030 Hb_000381_030 Hb_000254_040--Hb_000381_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.334734 9.89764 6.95553 5.39355 0.71484 0.891718
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.247279 0.648506 0.326216 37.7047 3.40666

CAGE analysis