Hb_000181_160

Information

Type -
Description -
Location Contig181: 126694-129721
Sequence    

Annotation

kegg
ID tcc:TCM_031600
description Serine/threonine-protein kinase WNK-related isoform 1
nr
ID XP_012076469.1
description PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
swissprot
ID P0C7P8
description Transcription factor EMB1444 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=1
trembl
ID A0A067LF64
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15317 PE=4 SV=1
Gene Ontology
ID GO:0016301
description serine threonine-protein kinase wnk-related isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000181_160 0.0 - - PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
2 Hb_004657_040 0.0973653673 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
3 Hb_001408_050 0.1074704253 - - conserved hypothetical protein [Ricinus communis]
4 Hb_009823_010 0.1123756862 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
5 Hb_001454_410 0.1168572372 - - PREDICTED: uncharacterized protein LOC105643453 [Jatropha curcas]
6 Hb_001221_480 0.1315310788 - - metal ion binding protein, putative [Ricinus communis]
7 Hb_000098_310 0.1397788823 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
8 Hb_001678_030 0.1401822557 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
9 Hb_000029_370 0.141854379 - - multidrug resistance pump, putative [Ricinus communis]
10 Hb_032631_050 0.1475333982 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
11 Hb_003453_030 0.1504336931 - - hypothetical protein JCGZ_26893 [Jatropha curcas]
12 Hb_000976_440 0.1504908708 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_002686_390 0.1505763347 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
14 Hb_001514_210 0.152226751 - - hypothetical protein VITISV_012133 [Vitis vinifera]
15 Hb_031042_030 0.153596985 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
16 Hb_000625_060 0.1543071461 - - Protein P21, putative [Ricinus communis]
17 Hb_001248_030 0.1570397378 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_011200_020 0.1579560273 - - aldo-keto reductase, putative [Ricinus communis]
19 Hb_000638_090 0.1643080861 - - ABC transporter family protein [Hevea brasiliensis]
20 Hb_003576_050 0.1643706727 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000181_160 Hb_000181_160 Hb_004657_040 Hb_004657_040 Hb_000181_160--Hb_004657_040 Hb_001408_050 Hb_001408_050 Hb_000181_160--Hb_001408_050 Hb_009823_010 Hb_009823_010 Hb_000181_160--Hb_009823_010 Hb_001454_410 Hb_001454_410 Hb_000181_160--Hb_001454_410 Hb_001221_480 Hb_001221_480 Hb_000181_160--Hb_001221_480 Hb_000098_310 Hb_000098_310 Hb_000181_160--Hb_000098_310 Hb_000625_060 Hb_000625_060 Hb_004657_040--Hb_000625_060 Hb_002686_390 Hb_002686_390 Hb_004657_040--Hb_002686_390 Hb_004657_040--Hb_001408_050 Hb_001514_210 Hb_001514_210 Hb_004657_040--Hb_001514_210 Hb_004657_040--Hb_009823_010 Hb_003453_030 Hb_003453_030 Hb_001408_050--Hb_003453_030 Hb_001408_050--Hb_009823_010 Hb_001678_030 Hb_001678_030 Hb_001408_050--Hb_001678_030 Hb_003576_050 Hb_003576_050 Hb_001408_050--Hb_003576_050 Hb_000638_090 Hb_000638_090 Hb_001408_050--Hb_000638_090 Hb_000976_440 Hb_000976_440 Hb_009823_010--Hb_000976_440 Hb_009823_010--Hb_003576_050 Hb_009823_010--Hb_000638_090 Hb_009823_010--Hb_000098_310 Hb_001454_410--Hb_001221_480 Hb_001454_410--Hb_003453_030 Hb_008695_130 Hb_008695_130 Hb_001454_410--Hb_008695_130 Hb_003807_020 Hb_003807_020 Hb_001454_410--Hb_003807_020 Hb_001454_410--Hb_001408_050 Hb_001221_480--Hb_003807_020 Hb_000649_030 Hb_000649_030 Hb_001221_480--Hb_000649_030 Hb_004447_020 Hb_004447_020 Hb_001221_480--Hb_004447_020 Hb_111582_010 Hb_111582_010 Hb_001221_480--Hb_111582_010 Hb_000335_050 Hb_000335_050 Hb_001221_480--Hb_000335_050 Hb_011200_020 Hb_011200_020 Hb_000098_310--Hb_011200_020 Hb_000098_310--Hb_003576_050 Hb_000098_310--Hb_001408_050 Hb_031042_030 Hb_031042_030 Hb_000098_310--Hb_031042_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.183368 3.17468 1.12293 1.53012 0.170169 0.0694087
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.222597 0.245205 0.0332244 6.57015 0.296226

CAGE analysis