Hb_129637_010

Information

Type -
Description -
Location Contig129637: 1-500
Sequence    

Annotation

kegg
ID pop:POPTR_0007s09730g
description hypothetical protein
nr
ID XP_011008829.1
description PREDICTED: alpha-mannosidase isoform X1 [Populus euphratica]
swissprot
ID C0HJB3
description Alpha-mannosidase OS=Canavalia ensiformis PE=1 SV=1
trembl
ID U5G4R2
description Alpha-mannosidase OS=Populus trichocarpa GN=POPTR_0007s09730g PE=3 SV=1
Gene Ontology
ID GO:0000326
description alpha-mannosidase isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_129637_010 0.0 - - PREDICTED: alpha-mannosidase isoform X1 [Populus euphratica]
2 Hb_000417_350 0.0802798862 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001053_110 0.085752762 - - PREDICTED: uncharacterized protein LOC105628699 [Jatropha curcas]
4 Hb_009711_040 0.1224448564 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
5 Hb_001369_620 0.1313083772 - - PREDICTED: protein EXORDIUM-like 3 [Jatropha curcas]
6 Hb_005333_120 0.1320416826 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
7 Hb_118707_020 0.1378818962 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000979_080 0.1403489544 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
9 Hb_000749_160 0.1418608814 - - calmodulin binding protein, putative [Ricinus communis]
10 Hb_014865_010 0.1429102683 - - hypothetical protein PRUPE_ppa017366mg, partial [Prunus persica]
11 Hb_000836_250 0.1437005394 - - hypothetical protein VITISV_022299 [Vitis vinifera]
12 Hb_005489_120 0.1457901602 - - leucine rich repeat receptor kinase, putative [Ricinus communis]
13 Hb_000347_230 0.1459677555 - - inter-alpha-trypsin inhibitor heavy chain, putative [Ricinus communis]
14 Hb_003171_070 0.1511618684 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Citrus sinensis]
15 Hb_001623_400 0.1516775203 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000993_020 0.151678864 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
17 Hb_000300_170 0.1545995182 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]
18 Hb_003266_060 0.154606438 - - PREDICTED: basic 7S globulin-like [Populus euphratica]
19 Hb_000380_210 0.1558414071 - - Cyclic nucleotide-gated channel 15 [Theobroma cacao]
20 Hb_003768_100 0.1576866488 - - hypothetical protein JCGZ_19930 [Jatropha curcas]

Gene co-expression network

sample Hb_129637_010 Hb_129637_010 Hb_000417_350 Hb_000417_350 Hb_129637_010--Hb_000417_350 Hb_001053_110 Hb_001053_110 Hb_129637_010--Hb_001053_110 Hb_009711_040 Hb_009711_040 Hb_129637_010--Hb_009711_040 Hb_001369_620 Hb_001369_620 Hb_129637_010--Hb_001369_620 Hb_005333_120 Hb_005333_120 Hb_129637_010--Hb_005333_120 Hb_118707_020 Hb_118707_020 Hb_129637_010--Hb_118707_020 Hb_000417_350--Hb_009711_040 Hb_000417_350--Hb_001053_110 Hb_000417_350--Hb_005333_120 Hb_000306_050 Hb_000306_050 Hb_000417_350--Hb_000306_050 Hb_003171_070 Hb_003171_070 Hb_000417_350--Hb_003171_070 Hb_000300_170 Hb_000300_170 Hb_001053_110--Hb_000300_170 Hb_005489_120 Hb_005489_120 Hb_001053_110--Hb_005489_120 Hb_001053_110--Hb_005333_120 Hb_001053_110--Hb_001369_620 Hb_020805_110 Hb_020805_110 Hb_009711_040--Hb_020805_110 Hb_000676_380 Hb_000676_380 Hb_009711_040--Hb_000676_380 Hb_009711_040--Hb_003171_070 Hb_009711_040--Hb_000306_050 Hb_003090_230 Hb_003090_230 Hb_009711_040--Hb_003090_230 Hb_000003_510 Hb_000003_510 Hb_001369_620--Hb_000003_510 Hb_002016_020 Hb_002016_020 Hb_001369_620--Hb_002016_020 Hb_003734_120 Hb_003734_120 Hb_001369_620--Hb_003734_120 Hb_003805_080 Hb_003805_080 Hb_001369_620--Hb_003805_080 Hb_001963_020 Hb_001963_020 Hb_001369_620--Hb_001963_020 Hb_004462_040 Hb_004462_040 Hb_005333_120--Hb_004462_040 Hb_003435_070 Hb_003435_070 Hb_005333_120--Hb_003435_070 Hb_002333_010 Hb_002333_010 Hb_005333_120--Hb_002333_010 Hb_001856_150 Hb_001856_150 Hb_005333_120--Hb_001856_150 Hb_000967_010 Hb_000967_010 Hb_118707_020--Hb_000967_010 Hb_008727_030 Hb_008727_030 Hb_118707_020--Hb_008727_030 Hb_188923_010 Hb_188923_010 Hb_118707_020--Hb_188923_010 Hb_135811_040 Hb_135811_040 Hb_118707_020--Hb_135811_040 Hb_118707_020--Hb_003435_070 Hb_000380_210 Hb_000380_210 Hb_118707_020--Hb_000380_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.887267 5.53846 6.65427 25.9657 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 31.5288 1.36911

CAGE analysis