Hb_000086_720

Information

Type -
Description -
Location Contig86: 657033-676879
Sequence    

Annotation

kegg
ID rcu:RCOM_1575720
description leucoanthocyanidin dioxygenase, putative (EC:1.14.11.23 1.14.11.9)
nr
ID XP_002513396.1
description leucoanthocyanidin dioxygenase, putative [Ricinus communis]
swissprot
ID Q9C899
description Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1
trembl
ID B9RI27
description Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis GN=RCOM_1575720 PE=4 SV=1
Gene Ontology
ID GO:0016706
description feruloyl ortho-hydroxylase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60791: 657530-669142
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000086_720 0.0 - - leucoanthocyanidin dioxygenase, putative [Ricinus communis]
2 Hb_001158_110 0.0803493462 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
3 Hb_001288_020 0.123356017 - - -
4 Hb_000187_110 0.1400471495 - - PREDICTED: serine carboxypeptidase-like 7 [Jatropha curcas]
5 Hb_001002_090 0.1444414506 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
6 Hb_021888_010 0.1449946669 - - PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Jatropha curcas]
7 Hb_010598_010 0.1476533833 - - PREDICTED: ankyrin-1-like [Jatropha curcas]
8 Hb_000161_230 0.1575151217 - - lactoylglutathione lyase, putative [Ricinus communis]
9 Hb_000029_420 0.1619690399 - - PREDICTED: putative lipid-transfer protein DIR1 [Jatropha curcas]
10 Hb_009070_030 0.1647608032 - - PREDICTED: mechanosensitive ion channel protein 10 [Jatropha curcas]
11 Hb_003768_110 0.1661925648 - - hypothetical protein POPTR_0004s12230g [Populus trichocarpa]
12 Hb_072997_010 0.1674527965 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
13 Hb_055440_010 0.1682204645 - - protein binding protein, putative [Ricinus communis]
14 Hb_111985_120 0.1698718974 - - dihydroflavonol-4-reductase [Vitis rotundifolia]
15 Hb_004096_010 0.1701044892 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 40 [Jatropha curcas]
16 Hb_111985_160 0.1734460304 - - hypothetical protein B456_010G008900 [Gossypium raimondii]
17 Hb_002081_220 0.1742539454 - - PREDICTED: uncharacterized protein LOC103707552 [Phoenix dactylifera]
18 Hb_009767_030 0.1750454238 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
19 Hb_001377_480 0.1766937559 transcription factor TF Family: MYB Myb domain protein 7, putative [Theobroma cacao]
20 Hb_001532_060 0.1798459474 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000086_720 Hb_000086_720 Hb_001158_110 Hb_001158_110 Hb_000086_720--Hb_001158_110 Hb_001288_020 Hb_001288_020 Hb_000086_720--Hb_001288_020 Hb_000187_110 Hb_000187_110 Hb_000086_720--Hb_000187_110 Hb_001002_090 Hb_001002_090 Hb_000086_720--Hb_001002_090 Hb_021888_010 Hb_021888_010 Hb_000086_720--Hb_021888_010 Hb_010598_010 Hb_010598_010 Hb_000086_720--Hb_010598_010 Hb_001158_110--Hb_001288_020 Hb_001158_110--Hb_021888_010 Hb_001158_110--Hb_000187_110 Hb_001158_110--Hb_001002_090 Hb_072997_010 Hb_072997_010 Hb_001158_110--Hb_072997_010 Hb_003413_020 Hb_003413_020 Hb_001288_020--Hb_003413_020 Hb_001288_020--Hb_072997_010 Hb_001005_170 Hb_001005_170 Hb_001288_020--Hb_001005_170 Hb_001288_020--Hb_010598_010 Hb_000161_230 Hb_000161_230 Hb_000187_110--Hb_000161_230 Hb_000979_080 Hb_000979_080 Hb_000187_110--Hb_000979_080 Hb_000187_110--Hb_001002_090 Hb_003226_050 Hb_003226_050 Hb_000187_110--Hb_003226_050 Hb_055440_010 Hb_055440_010 Hb_000187_110--Hb_055440_010 Hb_001633_120 Hb_001633_120 Hb_000187_110--Hb_001633_120 Hb_001002_090--Hb_055440_010 Hb_001002_090--Hb_000979_080 Hb_001002_090--Hb_072997_010 Hb_009767_030 Hb_009767_030 Hb_001002_090--Hb_009767_030 Hb_001776_070 Hb_001776_070 Hb_001002_090--Hb_001776_070 Hb_006573_260 Hb_006573_260 Hb_021888_010--Hb_006573_260 Hb_021888_010--Hb_001002_090 Hb_002081_220 Hb_002081_220 Hb_021888_010--Hb_002081_220 Hb_021888_010--Hb_009767_030 Hb_021888_010--Hb_000187_110 Hb_004096_010 Hb_004096_010 Hb_010598_010--Hb_004096_010 Hb_010598_010--Hb_072997_010 Hb_009070_030 Hb_009070_030 Hb_010598_010--Hb_009070_030 Hb_010598_010--Hb_055440_010 Hb_010598_010--Hb_001002_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.153647 0.641717 0.411515 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0180782 0 0.992692 0

CAGE analysis