Hb_004627_020

Information

Type -
Description -
Location Contig4627: 30007-33612
Sequence    

Annotation

kegg
ID rcu:RCOM_0332770
description Protein MLO, putative
nr
ID XP_002533246.1
description Protein MLO, putative [Ricinus communis]
swissprot
ID Q94KB7
description MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6 PE=2 SV=2
trembl
ID B9T4S7
description MLO-like protein OS=Ricinus communis GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004627_020 0.0 - - Protein MLO, putative [Ricinus communis]
2 Hb_001565_010 0.1018232319 - - hypothetical protein JCGZ_07371 [Jatropha curcas]
3 Hb_008899_030 0.108094502 - - Lipase class 3-related protein, putative [Theobroma cacao]
4 Hb_009554_030 0.1141181776 - - PREDICTED: chlorophyll synthase, chloroplastic [Prunus mume]
5 Hb_011537_020 0.1165984006 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
6 Hb_000203_080 0.1181650934 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
7 Hb_170878_070 0.1223959307 - - hypothetical protein EUGRSUZ_L008133, partial [Eucalyptus grandis]
8 Hb_094148_010 0.1228966125 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
9 Hb_003224_010 0.1229320394 - - -
10 Hb_002503_050 0.1237889869 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
11 Hb_000108_090 0.1283848597 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
12 Hb_005496_170 0.1297801069 - - sigma factor sigb regulation protein rsbq, putative [Ricinus communis]
13 Hb_009150_060 0.1307167677 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
14 Hb_003842_010 0.1307451488 - - receptor protein kinase, putative [Ricinus communis]
15 Hb_001018_080 0.1308538035 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001345_010 0.1338814166 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]
17 Hb_001660_050 0.1343091162 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Eucalyptus grandis]
18 Hb_000866_190 0.1349907204 - - transcription factor, putative [Ricinus communis]
19 Hb_039022_020 0.1362803166 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
20 Hb_002811_020 0.136602421 - - Cysteine synthase [Morus notabilis]

Gene co-expression network

sample Hb_004627_020 Hb_004627_020 Hb_001565_010 Hb_001565_010 Hb_004627_020--Hb_001565_010 Hb_008899_030 Hb_008899_030 Hb_004627_020--Hb_008899_030 Hb_009554_030 Hb_009554_030 Hb_004627_020--Hb_009554_030 Hb_011537_020 Hb_011537_020 Hb_004627_020--Hb_011537_020 Hb_000203_080 Hb_000203_080 Hb_004627_020--Hb_000203_080 Hb_170878_070 Hb_170878_070 Hb_004627_020--Hb_170878_070 Hb_000108_090 Hb_000108_090 Hb_001565_010--Hb_000108_090 Hb_094148_010 Hb_094148_010 Hb_001565_010--Hb_094148_010 Hb_000521_360 Hb_000521_360 Hb_001565_010--Hb_000521_360 Hb_001345_010 Hb_001345_010 Hb_001565_010--Hb_001345_010 Hb_001634_080 Hb_001634_080 Hb_001565_010--Hb_001634_080 Hb_008899_030--Hb_011537_020 Hb_039022_020 Hb_039022_020 Hb_008899_030--Hb_039022_020 Hb_000261_420 Hb_000261_420 Hb_008899_030--Hb_000261_420 Hb_001018_080 Hb_001018_080 Hb_008899_030--Hb_001018_080 Hb_011472_020 Hb_011472_020 Hb_008899_030--Hb_011472_020 Hb_004122_060 Hb_004122_060 Hb_009554_030--Hb_004122_060 Hb_059000_010 Hb_059000_010 Hb_009554_030--Hb_059000_010 Hb_000096_210 Hb_000096_210 Hb_009554_030--Hb_000096_210 Hb_000866_190 Hb_000866_190 Hb_009554_030--Hb_000866_190 Hb_014250_010 Hb_014250_010 Hb_009554_030--Hb_014250_010 Hb_015306_010 Hb_015306_010 Hb_009554_030--Hb_015306_010 Hb_011537_020--Hb_001018_080 Hb_000739_160 Hb_000739_160 Hb_011537_020--Hb_000739_160 Hb_002307_010 Hb_002307_010 Hb_011537_020--Hb_002307_010 Hb_011537_020--Hb_015306_010 Hb_000840_050 Hb_000840_050 Hb_000203_080--Hb_000840_050 Hb_001114_120 Hb_001114_120 Hb_000203_080--Hb_001114_120 Hb_003842_010 Hb_003842_010 Hb_000203_080--Hb_003842_010 Hb_001329_110 Hb_001329_110 Hb_000203_080--Hb_001329_110 Hb_002622_010 Hb_002622_010 Hb_000203_080--Hb_002622_010 Hb_175758_010 Hb_175758_010 Hb_000203_080--Hb_175758_010 Hb_170878_070--Hb_001565_010 Hb_170878_070--Hb_094148_010 Hb_001186_120 Hb_001186_120 Hb_170878_070--Hb_001186_120 Hb_000215_130 Hb_000215_130 Hb_170878_070--Hb_000215_130 Hb_001366_050 Hb_001366_050 Hb_170878_070--Hb_001366_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.783865 1.30034 0.804073 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0220546 0.05206 0 1.93272 1.21097

CAGE analysis