Hb_003842_010

Information

Type -
Description -
Location Contig3842: 13780-17173
Sequence    

Annotation

kegg
ID rcu:RCOM_1748910
description receptor protein kinase, putative (EC:1.3.1.74 2.7.11.26)
nr
ID XP_002518223.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID Q9LRT1
description Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1
trembl
ID B9RWV4
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_1748910 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probably inactive leucine-rich repeat receptor-like protein kinase at3g28040

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38703: 13726-17213
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003842_010 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_001345_010 0.0858659406 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]
3 Hb_005276_220 0.0872931649 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
4 Hb_002475_030 0.0995703334 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000203_080 0.1009272741 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
6 Hb_003085_080 0.1009282535 - - nucleic acid binding protein, putative [Ricinus communis]
7 Hb_009150_060 0.1013173369 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
8 Hb_001358_120 0.106784452 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
9 Hb_004128_090 0.1079623744 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
10 Hb_005523_050 0.1137767704 - - hypothetical protein JCGZ_09175 [Jatropha curcas]
11 Hb_002811_020 0.1151944627 - - Cysteine synthase [Morus notabilis]
12 Hb_011472_020 0.1173432142 - - PREDICTED: mucin-17-like [Jatropha curcas]
13 Hb_001018_080 0.1178207196 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001318_120 0.1185876945 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
15 Hb_000521_360 0.1231343772 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
16 Hb_010839_010 0.1232053816 - - receptor-kinase, putative [Ricinus communis]
17 Hb_005542_040 0.1256772978 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
18 Hb_010519_020 0.1267370058 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
19 Hb_004627_020 0.1307451488 - - Protein MLO, putative [Ricinus communis]
20 Hb_011537_020 0.1315869052 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]

Gene co-expression network

sample Hb_003842_010 Hb_003842_010 Hb_001345_010 Hb_001345_010 Hb_003842_010--Hb_001345_010 Hb_005276_220 Hb_005276_220 Hb_003842_010--Hb_005276_220 Hb_002475_030 Hb_002475_030 Hb_003842_010--Hb_002475_030 Hb_000203_080 Hb_000203_080 Hb_003842_010--Hb_000203_080 Hb_003085_080 Hb_003085_080 Hb_003842_010--Hb_003085_080 Hb_009150_060 Hb_009150_060 Hb_003842_010--Hb_009150_060 Hb_007676_040 Hb_007676_040 Hb_001345_010--Hb_007676_040 Hb_000521_360 Hb_000521_360 Hb_001345_010--Hb_000521_360 Hb_005542_040 Hb_005542_040 Hb_001345_010--Hb_005542_040 Hb_001565_010 Hb_001565_010 Hb_001345_010--Hb_001565_010 Hb_001345_010--Hb_005276_220 Hb_011472_020 Hb_011472_020 Hb_005276_220--Hb_011472_020 Hb_000403_110 Hb_000403_110 Hb_005276_220--Hb_000403_110 Hb_001318_120 Hb_001318_120 Hb_005276_220--Hb_001318_120 Hb_005276_220--Hb_005542_040 Hb_175758_010 Hb_175758_010 Hb_005276_220--Hb_175758_010 Hb_010519_020 Hb_010519_020 Hb_005276_220--Hb_010519_020 Hb_004128_090 Hb_004128_090 Hb_002475_030--Hb_004128_090 Hb_004010_090 Hb_004010_090 Hb_002475_030--Hb_004010_090 Hb_002475_030--Hb_009150_060 Hb_002475_030--Hb_003085_080 Hb_010839_010 Hb_010839_010 Hb_002475_030--Hb_010839_010 Hb_000840_050 Hb_000840_050 Hb_000203_080--Hb_000840_050 Hb_001114_120 Hb_001114_120 Hb_000203_080--Hb_001114_120 Hb_001329_110 Hb_001329_110 Hb_000203_080--Hb_001329_110 Hb_002622_010 Hb_002622_010 Hb_000203_080--Hb_002622_010 Hb_000203_080--Hb_175758_010 Hb_003085_080--Hb_004128_090 Hb_003085_080--Hb_000203_080 Hb_003085_080--Hb_010839_010 Hb_001014_150 Hb_001014_150 Hb_003085_080--Hb_001014_150 Hb_001300_140 Hb_001300_140 Hb_009150_060--Hb_001300_140 Hb_009150_060--Hb_004010_090 Hb_000836_260 Hb_000836_260 Hb_009150_060--Hb_000836_260 Hb_009150_060--Hb_004128_090 Hb_011440_010 Hb_011440_010 Hb_009150_060--Hb_011440_010 Hb_009150_060--Hb_010839_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.462188 13.8424 18.8722 12.4339 0.244334 0.496475
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.183111 0.0617563 0.0197197 42.8783 15.6184

CAGE analysis