Hb_004128_090

Information

Type transcription factor
Description TF Family: WRKY
Location Contig4128: 82313-86662
Sequence    

Annotation

kegg
ID rcu:RCOM_0819900
description hypothetical protein
nr
ID XP_012082254.1
description PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
swissprot
ID Q9ZUU0
description WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2
trembl
ID M9TMC6
description Uncharacterized protein OS=Jatropha curcas GN=WRKY04 PE=4 SV=1
Gene Ontology
ID GO:0003700
description wrky transcription factor 44-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40861: 82310-86788
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004128_090 0.0 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
2 Hb_004010_090 0.0589529737 - - ATP binding protein, putative [Ricinus communis]
3 Hb_002475_030 0.0669345067 - - conserved hypothetical protein [Ricinus communis]
4 Hb_010839_010 0.0687542608 - - receptor-kinase, putative [Ricinus communis]
5 Hb_009150_060 0.090780484 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
6 Hb_003085_080 0.0974047692 - - nucleic acid binding protein, putative [Ricinus communis]
7 Hb_009812_010 0.0987226308 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_003842_010 0.1079623744 - - receptor protein kinase, putative [Ricinus communis]
9 Hb_006916_020 0.1115831629 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
10 Hb_004586_110 0.1124249138 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
11 Hb_000684_490 0.1156043568 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
12 Hb_000011_120 0.1160848198 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
13 Hb_005116_010 0.1171845281 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
14 Hb_001514_070 0.1199942177 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_000471_010 0.1224400979 - - ATP binding protein, putative [Ricinus communis]
16 Hb_029576_080 0.1250606435 - - Aspartic proteinase precursor, putative [Ricinus communis]
17 Hb_000203_080 0.1267047187 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
18 Hb_000834_210 0.1280531001 - - unnamed protein product [Vitis vinifera]
19 Hb_000836_260 0.1299120659 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
20 Hb_010334_040 0.1314404586 - - PREDICTED: uncharacterized protein LOC105108579 [Populus euphratica]

Gene co-expression network

sample Hb_004128_090 Hb_004128_090 Hb_004010_090 Hb_004010_090 Hb_004128_090--Hb_004010_090 Hb_002475_030 Hb_002475_030 Hb_004128_090--Hb_002475_030 Hb_010839_010 Hb_010839_010 Hb_004128_090--Hb_010839_010 Hb_009150_060 Hb_009150_060 Hb_004128_090--Hb_009150_060 Hb_003085_080 Hb_003085_080 Hb_004128_090--Hb_003085_080 Hb_009812_010 Hb_009812_010 Hb_004128_090--Hb_009812_010 Hb_004010_090--Hb_002475_030 Hb_004010_090--Hb_010839_010 Hb_004010_090--Hb_009150_060 Hb_004010_090--Hb_009812_010 Hb_001514_070 Hb_001514_070 Hb_004010_090--Hb_001514_070 Hb_002475_030--Hb_009150_060 Hb_002475_030--Hb_003085_080 Hb_003842_010 Hb_003842_010 Hb_002475_030--Hb_003842_010 Hb_002475_030--Hb_010839_010 Hb_010839_010--Hb_009812_010 Hb_029576_080 Hb_029576_080 Hb_010839_010--Hb_029576_080 Hb_000011_120 Hb_000011_120 Hb_010839_010--Hb_000011_120 Hb_005116_010 Hb_005116_010 Hb_010839_010--Hb_005116_010 Hb_001300_140 Hb_001300_140 Hb_009150_060--Hb_001300_140 Hb_000836_260 Hb_000836_260 Hb_009150_060--Hb_000836_260 Hb_011440_010 Hb_011440_010 Hb_009150_060--Hb_011440_010 Hb_009150_060--Hb_010839_010 Hb_003085_080--Hb_003842_010 Hb_000203_080 Hb_000203_080 Hb_003085_080--Hb_000203_080 Hb_003085_080--Hb_010839_010 Hb_001014_150 Hb_001014_150 Hb_003085_080--Hb_001014_150 Hb_009812_010--Hb_005116_010 Hb_004586_110 Hb_004586_110 Hb_009812_010--Hb_004586_110 Hb_010334_040 Hb_010334_040 Hb_009812_010--Hb_010334_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0186091 7.52789 9.43195 9.76909 0.070287 0.0436997
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.063414 0.133059 0.0631776 36.89 11.6191

CAGE analysis