Hb_000261_420

Information

Type -
Description -
Location Contig261: 375929-378433
Sequence    

Annotation

kegg
ID rcu:RCOM_1019790
description hypothetical protein
nr
ID XP_012071146.1
description PREDICTED: receptor like protein kinase S.2 [Jatropha curcas]
swissprot
ID O48837
description Receptor like protein kinase S.2 OS=Arabidopsis thaliana GN=LECRKS2 PE=2 SV=2
trembl
ID A0A067KT28
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01128 PE=3 SV=1
Gene Ontology
ID GO:0005886
description receptor like protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000261_420 0.0 - - PREDICTED: receptor like protein kinase S.2 [Jatropha curcas]
2 Hb_008899_030 0.1130775056 - - Lipase class 3-related protein, putative [Theobroma cacao]
3 Hb_010417_100 0.1350266963 - - PREDICTED: respiratory burst oxidase homolog protein A [Jatropha curcas]
4 Hb_005467_010 0.1360075451 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
5 Hb_011537_020 0.1426496191 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
6 Hb_003879_020 0.1482604343 - - PREDICTED: MATE efflux family protein 1-like [Jatropha curcas]
7 Hb_003142_060 0.1544785317 - - PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Jatropha curcas]
8 Hb_000024_130 0.1587170487 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000847_020 0.1599834602 - - PREDICTED: ras-related protein RABA5b [Jatropha curcas]
10 Hb_001636_010 0.1639518549 - - hypothetical protein JCGZ_01264 [Jatropha curcas]
11 Hb_004421_010 0.1640867092 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
12 Hb_001018_080 0.1652822255 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000398_140 0.168484332 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]
14 Hb_001956_080 0.1691351796 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 14 [Jatropha curcas]
15 Hb_001922_060 0.1702086856 - - ATP binding protein, putative [Ricinus communis]
16 Hb_000840_050 0.1706753696 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
17 Hb_005357_020 0.1708961648 - - conserved hypothetical protein [Ricinus communis]
18 Hb_064985_010 0.174075308 - - Leucine-rich repeat transmembrane protein kinase, putative [Theobroma cacao]
19 Hb_000575_090 0.1766924564 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 24 [Populus euphratica]
20 Hb_000096_210 0.1767030273 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]

Gene co-expression network

sample Hb_000261_420 Hb_000261_420 Hb_008899_030 Hb_008899_030 Hb_000261_420--Hb_008899_030 Hb_010417_100 Hb_010417_100 Hb_000261_420--Hb_010417_100 Hb_005467_010 Hb_005467_010 Hb_000261_420--Hb_005467_010 Hb_011537_020 Hb_011537_020 Hb_000261_420--Hb_011537_020 Hb_003879_020 Hb_003879_020 Hb_000261_420--Hb_003879_020 Hb_003142_060 Hb_003142_060 Hb_000261_420--Hb_003142_060 Hb_008899_030--Hb_011537_020 Hb_004627_020 Hb_004627_020 Hb_008899_030--Hb_004627_020 Hb_039022_020 Hb_039022_020 Hb_008899_030--Hb_039022_020 Hb_001018_080 Hb_001018_080 Hb_008899_030--Hb_001018_080 Hb_011472_020 Hb_011472_020 Hb_008899_030--Hb_011472_020 Hb_005357_020 Hb_005357_020 Hb_010417_100--Hb_005357_020 Hb_007894_030 Hb_007894_030 Hb_010417_100--Hb_007894_030 Hb_001636_010 Hb_001636_010 Hb_010417_100--Hb_001636_010 Hb_000840_050 Hb_000840_050 Hb_010417_100--Hb_000840_050 Hb_000085_220 Hb_000085_220 Hb_010417_100--Hb_000085_220 Hb_000497_100 Hb_000497_100 Hb_010417_100--Hb_000497_100 Hb_005467_010--Hb_008899_030 Hb_003987_030 Hb_003987_030 Hb_005467_010--Hb_003987_030 Hb_005467_010--Hb_011537_020 Hb_026549_050 Hb_026549_050 Hb_005467_010--Hb_026549_050 Hb_001922_060 Hb_001922_060 Hb_005467_010--Hb_001922_060 Hb_011537_020--Hb_001018_080 Hb_000739_160 Hb_000739_160 Hb_011537_020--Hb_000739_160 Hb_002307_010 Hb_002307_010 Hb_011537_020--Hb_002307_010 Hb_011537_020--Hb_004627_020 Hb_015306_010 Hb_015306_010 Hb_011537_020--Hb_015306_010 Hb_001439_010 Hb_001439_010 Hb_003879_020--Hb_001439_010 Hb_000398_140 Hb_000398_140 Hb_003879_020--Hb_000398_140 Hb_000731_210 Hb_000731_210 Hb_003879_020--Hb_000731_210 Hb_003607_140 Hb_003607_140 Hb_003879_020--Hb_003607_140 Hb_000210_040 Hb_000210_040 Hb_003879_020--Hb_000210_040 Hb_010174_180 Hb_010174_180 Hb_003879_020--Hb_010174_180 Hb_000003_020 Hb_000003_020 Hb_003142_060--Hb_000003_020 Hb_000834_040 Hb_000834_040 Hb_003142_060--Hb_000834_040 Hb_003106_230 Hb_003106_230 Hb_003142_060--Hb_003106_230 Hb_001008_110 Hb_001008_110 Hb_003142_060--Hb_001008_110 Hb_042202_020 Hb_042202_020 Hb_003142_060--Hb_042202_020 Hb_000024_130 Hb_000024_130 Hb_003142_060--Hb_000024_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.02796 1.65344 1.87536 0 0.00730347
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.430061 0.105792 2.782 1.32704

CAGE analysis