Hb_005467_010

Information

Type transcription factor
Description TF Family: ERF
Location Contig5467: 8878-15666
Sequence    

Annotation

kegg
ID rcu:RCOM_0587210
description hypothetical protein
nr
ID XP_002523002.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9CA27
description Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana GN=ERF118 PE=2 SV=1
trembl
ID B9SAI3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0587210 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005467_010 0.0 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
2 Hb_000261_420 0.1360075451 - - PREDICTED: receptor like protein kinase S.2 [Jatropha curcas]
3 Hb_008899_030 0.167606461 - - Lipase class 3-related protein, putative [Theobroma cacao]
4 Hb_003987_030 0.1719246041 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
5 Hb_011537_020 0.1809892394 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
6 Hb_026549_050 0.1828560573 - - PREDICTED: uncharacterized protein LOC105636246 isoform X2 [Jatropha curcas]
7 Hb_001922_060 0.186583654 - - ATP binding protein, putative [Ricinus communis]
8 Hb_078361_010 0.1885674626 - - PREDICTED: AT-hook motif nuclear-localized protein 1 [Jatropha curcas]
9 Hb_000811_010 0.1897669741 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF118 [Jatropha curcas]
10 Hb_007416_290 0.190479815 - - PREDICTED: plasma membrane ATPase 4-like [Pyrus x bretschneideri]
11 Hb_010417_100 0.1913028215 - - PREDICTED: respiratory burst oxidase homolog protein A [Jatropha curcas]
12 Hb_000946_070 0.1959580528 - - chaperone protein DNAj, putative [Ricinus communis]
13 Hb_006594_060 0.198135466 transcription factor TF Family: HSF PREDICTED: heat shock factor protein HSF24 [Jatropha curcas]
14 Hb_138606_020 0.1984294533 - - Nitrate transporter2.5 [Theobroma cacao]
15 Hb_029260_010 0.1993521603 - - nitrate transporter, putative [Ricinus communis]
16 Hb_012743_020 0.2025864933 - - serine/threonine protein phosphatase, putative [Ricinus communis]
17 Hb_000840_050 0.2027867139 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
18 Hb_004324_030 0.203478889 - - PREDICTED: probable protein phosphatase 2C 8 [Jatropha curcas]
19 Hb_000155_040 0.2036469852 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
20 Hb_022250_160 0.2036978107 - - respiratory burst oxidase A [Manihot esculenta]

Gene co-expression network

sample Hb_005467_010 Hb_005467_010 Hb_000261_420 Hb_000261_420 Hb_005467_010--Hb_000261_420 Hb_008899_030 Hb_008899_030 Hb_005467_010--Hb_008899_030 Hb_003987_030 Hb_003987_030 Hb_005467_010--Hb_003987_030 Hb_011537_020 Hb_011537_020 Hb_005467_010--Hb_011537_020 Hb_026549_050 Hb_026549_050 Hb_005467_010--Hb_026549_050 Hb_001922_060 Hb_001922_060 Hb_005467_010--Hb_001922_060 Hb_000261_420--Hb_008899_030 Hb_010417_100 Hb_010417_100 Hb_000261_420--Hb_010417_100 Hb_000261_420--Hb_011537_020 Hb_003879_020 Hb_003879_020 Hb_000261_420--Hb_003879_020 Hb_003142_060 Hb_003142_060 Hb_000261_420--Hb_003142_060 Hb_008899_030--Hb_011537_020 Hb_004627_020 Hb_004627_020 Hb_008899_030--Hb_004627_020 Hb_039022_020 Hb_039022_020 Hb_008899_030--Hb_039022_020 Hb_001018_080 Hb_001018_080 Hb_008899_030--Hb_001018_080 Hb_011472_020 Hb_011472_020 Hb_008899_030--Hb_011472_020 Hb_000236_050 Hb_000236_050 Hb_003987_030--Hb_000236_050 Hb_002750_010 Hb_002750_010 Hb_003987_030--Hb_002750_010 Hb_008695_130 Hb_008695_130 Hb_003987_030--Hb_008695_130 Hb_000034_030 Hb_000034_030 Hb_003987_030--Hb_000034_030 Hb_006711_020 Hb_006711_020 Hb_003987_030--Hb_006711_020 Hb_005237_040 Hb_005237_040 Hb_003987_030--Hb_005237_040 Hb_011537_020--Hb_001018_080 Hb_000739_160 Hb_000739_160 Hb_011537_020--Hb_000739_160 Hb_002307_010 Hb_002307_010 Hb_011537_020--Hb_002307_010 Hb_011537_020--Hb_004627_020 Hb_015306_010 Hb_015306_010 Hb_011537_020--Hb_015306_010 Hb_000181_210 Hb_000181_210 Hb_026549_050--Hb_000181_210 Hb_026549_050--Hb_001922_060 Hb_004324_030 Hb_004324_030 Hb_026549_050--Hb_004324_030 Hb_000002_360 Hb_000002_360 Hb_026549_050--Hb_000002_360 Hb_000003_020 Hb_000003_020 Hb_026549_050--Hb_000003_020 Hb_000832_280 Hb_000832_280 Hb_026549_050--Hb_000832_280 Hb_001922_060--Hb_000181_210 Hb_001922_060--Hb_000832_280 Hb_001922_060--Hb_000002_360 Hb_001922_060--Hb_004324_030 Hb_000567_180 Hb_000567_180 Hb_001922_060--Hb_000567_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0818726 0.0466485 0.109175 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0354062 0 0.156283 0.0729022

CAGE analysis