Hb_001048_100

Information

Type -
Description -
Location Contig1048: 135152-140089
Sequence    

Annotation

kegg
ID pop:POPTR_0007s14600g
description POPTRDRAFT_1083939; hypothetical protein
nr
ID XP_012079471.1
description PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]
swissprot
ID Q5RBU7
description Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1
trembl
ID A0A067KAT2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12589 PE=4 SV=1
Gene Ontology
ID GO:0005773
description lysosomal pro-x carboxypeptidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01644: 135182-140146
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001048_100 0.0 - - PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]
2 Hb_031385_010 0.079447798 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
3 Hb_000760_080 0.1021750297 - - mutt domain protein, putative [Ricinus communis]
4 Hb_000731_210 0.1026910402 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002301_370 0.1046806579 - - hypothetical protein JCGZ_21454 [Jatropha curcas]
6 Hb_000230_360 0.1061000722 - - PREDICTED: BI1-like protein [Jatropha curcas]
7 Hb_000061_310 0.1088018161 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
8 Hb_002316_020 0.1128658632 - - PREDICTED: uncharacterized protein LOC105640407 [Jatropha curcas]
9 Hb_005568_050 0.1195358522 - - ascorbate peroxidase [Hevea brasiliensis]
10 Hb_010174_180 0.1206783694 - - protein binding protein, putative [Ricinus communis]
11 Hb_003687_040 0.1215463205 - - PREDICTED: uncharacterized protein LOC105632153 [Jatropha curcas]
12 Hb_000024_130 0.127572603 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000254_010 0.1299987096 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
14 Hb_003106_110 0.131829945 - - betaine aldehyde dehydrogenase 1, chloroplastic [Jatropha curcas]
15 Hb_007575_030 0.1348717912 - - PREDICTED: protein RCC2 homolog [Jatropha curcas]
16 Hb_001019_160 0.1356685043 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000318_170 0.1381529171 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
18 Hb_000689_010 0.1385910976 desease resistance Gene Name: LRR_8 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
19 Hb_000012_320 0.138697706 - - PREDICTED: uncharacterized protein LOC105638164 [Jatropha curcas]
20 Hb_001675_270 0.1395739641 - - PREDICTED: probable inactive nicotinamidase At3g16190 [Jatropha curcas]

Gene co-expression network

sample Hb_001048_100 Hb_001048_100 Hb_031385_010 Hb_031385_010 Hb_001048_100--Hb_031385_010 Hb_000760_080 Hb_000760_080 Hb_001048_100--Hb_000760_080 Hb_000731_210 Hb_000731_210 Hb_001048_100--Hb_000731_210 Hb_002301_370 Hb_002301_370 Hb_001048_100--Hb_002301_370 Hb_000230_360 Hb_000230_360 Hb_001048_100--Hb_000230_360 Hb_000061_310 Hb_000061_310 Hb_001048_100--Hb_000061_310 Hb_031385_010--Hb_000230_360 Hb_031385_010--Hb_000061_310 Hb_002316_020 Hb_002316_020 Hb_031385_010--Hb_002316_020 Hb_010174_180 Hb_010174_180 Hb_031385_010--Hb_010174_180 Hb_003687_040 Hb_003687_040 Hb_031385_010--Hb_003687_040 Hb_000024_130 Hb_000024_130 Hb_000760_080--Hb_000024_130 Hb_005568_050 Hb_005568_050 Hb_000760_080--Hb_005568_050 Hb_002503_050 Hb_002503_050 Hb_000760_080--Hb_002503_050 Hb_033312_050 Hb_033312_050 Hb_000760_080--Hb_033312_050 Hb_000760_080--Hb_000731_210 Hb_000731_210--Hb_002301_370 Hb_000731_210--Hb_000024_130 Hb_000731_210--Hb_031385_010 Hb_000318_170 Hb_000318_170 Hb_000731_210--Hb_000318_170 Hb_003106_230 Hb_003106_230 Hb_000731_210--Hb_003106_230 Hb_002301_370--Hb_000230_360 Hb_001440_010 Hb_001440_010 Hb_002301_370--Hb_001440_010 Hb_002301_370--Hb_031385_010 Hb_000398_140 Hb_000398_140 Hb_002301_370--Hb_000398_140 Hb_000230_360--Hb_000061_310 Hb_000230_360--Hb_001440_010 Hb_000834_220 Hb_000834_220 Hb_000230_360--Hb_000834_220 Hb_001019_160 Hb_001019_160 Hb_000230_360--Hb_001019_160 Hb_000061_310--Hb_003687_040 Hb_000061_310--Hb_001019_160 Hb_000061_310--Hb_002301_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.02248 14.8279 31.6334 21.0763 1.1044 0.90202
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.410557 0.340984 2.38164 20.7362 16.9867

CAGE analysis