Hb_000760_080

Information

Type -
Description -
Location Contig760: 108402-111830
Sequence    

Annotation

kegg
ID rcu:RCOM_1146780
description mutt domain protein, putative (EC:3.6.1.22)
nr
ID XP_002530431.1
description mutt domain protein, putative [Ricinus communis]
swissprot
ID Q94B74
description Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1
trembl
ID B9SWR2
description Mutt domain protein, putative OS=Ricinus communis GN=RCOM_1146780 PE=4 SV=1
Gene Ontology
ID GO:0016787
description nudix hydrolase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57270: 109269-110076 , PASA_asmbl_57272: 111274-111672
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000760_080 0.0 - - mutt domain protein, putative [Ricinus communis]
2 Hb_001048_100 0.1021750297 - - PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]
3 Hb_000024_130 0.1054508184 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005568_050 0.1100059311 - - ascorbate peroxidase [Hevea brasiliensis]
5 Hb_002503_050 0.1103685903 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
6 Hb_033312_050 0.1115826978 - - PREDICTED: uncharacterized protein LOC105638598, partial [Jatropha curcas]
7 Hb_000731_210 0.1128587681 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003106_110 0.11735775 - - betaine aldehyde dehydrogenase 1, chloroplastic [Jatropha curcas]
9 Hb_000165_070 0.1175144961 - - hypothetical protein JCGZ_01211 [Jatropha curcas]
10 Hb_000739_160 0.1228655435 - - DNA binding protein, putative [Ricinus communis]
11 Hb_002301_370 0.1286302731 - - hypothetical protein JCGZ_21454 [Jatropha curcas]
12 Hb_001018_080 0.1298863708 - - conserved hypothetical protein [Ricinus communis]
13 Hb_011537_020 0.1341748791 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
14 Hb_003106_230 0.1357920527 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like [Jatropha curcas]
15 Hb_007575_030 0.1369299165 - - PREDICTED: protein RCC2 homolog [Jatropha curcas]
16 Hb_083412_010 0.1372244194 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
17 Hb_000096_210 0.1381282834 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
18 Hb_002316_020 0.1381397545 - - PREDICTED: uncharacterized protein LOC105640407 [Jatropha curcas]
19 Hb_000438_010 0.1387825552 - - -
20 Hb_000189_160 0.1406772192 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]

Gene co-expression network

sample Hb_000760_080 Hb_000760_080 Hb_001048_100 Hb_001048_100 Hb_000760_080--Hb_001048_100 Hb_000024_130 Hb_000024_130 Hb_000760_080--Hb_000024_130 Hb_005568_050 Hb_005568_050 Hb_000760_080--Hb_005568_050 Hb_002503_050 Hb_002503_050 Hb_000760_080--Hb_002503_050 Hb_033312_050 Hb_033312_050 Hb_000760_080--Hb_033312_050 Hb_000731_210 Hb_000731_210 Hb_000760_080--Hb_000731_210 Hb_031385_010 Hb_031385_010 Hb_001048_100--Hb_031385_010 Hb_001048_100--Hb_000731_210 Hb_002301_370 Hb_002301_370 Hb_001048_100--Hb_002301_370 Hb_000230_360 Hb_000230_360 Hb_001048_100--Hb_000230_360 Hb_000061_310 Hb_000061_310 Hb_001048_100--Hb_000061_310 Hb_000024_130--Hb_000731_210 Hb_007575_030 Hb_007575_030 Hb_000024_130--Hb_007575_030 Hb_003106_230 Hb_003106_230 Hb_000024_130--Hb_003106_230 Hb_042202_020 Hb_042202_020 Hb_000024_130--Hb_042202_020 Hb_003142_060 Hb_003142_060 Hb_000024_130--Hb_003142_060 Hb_001675_270 Hb_001675_270 Hb_005568_050--Hb_001675_270 Hb_000042_380 Hb_000042_380 Hb_005568_050--Hb_000042_380 Hb_003607_140 Hb_003607_140 Hb_005568_050--Hb_003607_140 Hb_010174_180 Hb_010174_180 Hb_005568_050--Hb_010174_180 Hb_002316_020 Hb_002316_020 Hb_005568_050--Hb_002316_020 Hb_000189_160 Hb_000189_160 Hb_002503_050--Hb_000189_160 Hb_014250_010 Hb_014250_010 Hb_002503_050--Hb_014250_010 Hb_001345_020 Hb_001345_020 Hb_002503_050--Hb_001345_020 Hb_000046_430 Hb_000046_430 Hb_002503_050--Hb_000046_430 Hb_009554_030 Hb_009554_030 Hb_002503_050--Hb_009554_030 Hb_002304_190 Hb_002304_190 Hb_033312_050--Hb_002304_190 Hb_001349_020 Hb_001349_020 Hb_033312_050--Hb_001349_020 Hb_001832_110 Hb_001832_110 Hb_033312_050--Hb_001832_110 Hb_005730_070 Hb_005730_070 Hb_033312_050--Hb_005730_070 Hb_000017_320 Hb_000017_320 Hb_033312_050--Hb_000017_320 Hb_000731_210--Hb_002301_370 Hb_000731_210--Hb_031385_010 Hb_000318_170 Hb_000318_170 Hb_000731_210--Hb_000318_170 Hb_000731_210--Hb_003106_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0842192 1.74421 3.02373 1.75486 0.0569672 0.0555461
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.133964 0.0526948 0.0987646 2.90515 1.70424

CAGE analysis