Hb_001501_020

Information

Type -
Description -
Location Contig1501: 32066-35492
Sequence    

Annotation

kegg
ID cic:CICLE_v10024756mg
description hypothetical protein
nr
ID XP_012067452.1
description PREDICTED: receptor-like protein kinase [Jatropha curcas]
swissprot
ID P93194
description Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2
trembl
ID A0A067LCV0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26947 PE=4 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12557: 32882-33195 , PASA_asmbl_12558: 33605-34058
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001501_020 0.0 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
2 Hb_007113_020 0.0874437794 - - -
3 Hb_000500_360 0.1010938786 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
4 Hb_002030_090 0.1140860388 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
5 Hb_001266_130 0.1144314398 - - PREDICTED: soluble inorganic pyrophosphatase-like [Jatropha curcas]
6 Hb_000261_370 0.1193114605 - - -
7 Hb_003224_010 0.1209431269 - - -
8 Hb_007205_020 0.1213040188 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
9 Hb_003849_030 0.123437441 - - hypothetical protein AALP_AA5G029900 [Arabis alpina]
10 Hb_000694_050 0.1240967403 - - Nuclease PA3, putative [Ricinus communis]
11 Hb_094439_010 0.1285136842 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
12 Hb_000020_020 0.1290871081 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
13 Hb_000147_020 0.130461659 - - PREDICTED: uncharacterized protein LOC105638303 [Jatropha curcas]
14 Hb_001579_060 0.1306578055 - - carbonic anhydrase, putative [Ricinus communis]
15 Hb_006827_030 0.1309356325 - - oligopeptide transporter, putative [Ricinus communis]
16 Hb_008878_020 0.1311976206 - - PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Populus euphratica]
17 Hb_031201_010 0.1319853711 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
18 Hb_009102_010 0.1325637578 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_000987_020 0.1327741361 - - PREDICTED: protein trichome birefringence-like 35 [Jatropha curcas]
20 Hb_171168_010 0.1330326698 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001501_020 Hb_001501_020 Hb_007113_020 Hb_007113_020 Hb_001501_020--Hb_007113_020 Hb_000500_360 Hb_000500_360 Hb_001501_020--Hb_000500_360 Hb_002030_090 Hb_002030_090 Hb_001501_020--Hb_002030_090 Hb_001266_130 Hb_001266_130 Hb_001501_020--Hb_001266_130 Hb_000261_370 Hb_000261_370 Hb_001501_020--Hb_000261_370 Hb_003224_010 Hb_003224_010 Hb_001501_020--Hb_003224_010 Hb_007113_020--Hb_000261_370 Hb_006827_030 Hb_006827_030 Hb_007113_020--Hb_006827_030 Hb_003849_030 Hb_003849_030 Hb_007113_020--Hb_003849_030 Hb_171168_010 Hb_171168_010 Hb_007113_020--Hb_171168_010 Hb_127661_010 Hb_127661_010 Hb_007113_020--Hb_127661_010 Hb_000147_020 Hb_000147_020 Hb_000500_360--Hb_000147_020 Hb_009102_010 Hb_009102_010 Hb_000500_360--Hb_009102_010 Hb_000049_170 Hb_000049_170 Hb_000500_360--Hb_000049_170 Hb_002845_020 Hb_002845_020 Hb_000500_360--Hb_002845_020 Hb_001285_020 Hb_001285_020 Hb_000500_360--Hb_001285_020 Hb_008878_020 Hb_008878_020 Hb_002030_090--Hb_008878_020 Hb_093364_010 Hb_093364_010 Hb_002030_090--Hb_093364_010 Hb_001579_060 Hb_001579_060 Hb_002030_090--Hb_001579_060 Hb_000987_020 Hb_000987_020 Hb_002030_090--Hb_000987_020 Hb_000037_200 Hb_000037_200 Hb_002030_090--Hb_000037_200 Hb_029095_010 Hb_029095_010 Hb_002030_090--Hb_029095_010 Hb_000020_020 Hb_000020_020 Hb_001266_130--Hb_000020_020 Hb_001266_130--Hb_008878_020 Hb_000212_270 Hb_000212_270 Hb_001266_130--Hb_000212_270 Hb_000062_050 Hb_000062_050 Hb_001266_130--Hb_000062_050 Hb_000046_430 Hb_000046_430 Hb_001266_130--Hb_000046_430 Hb_000261_370--Hb_127661_010 Hb_029576_100 Hb_029576_100 Hb_000261_370--Hb_029576_100 Hb_005496_170 Hb_005496_170 Hb_000261_370--Hb_005496_170 Hb_001634_080 Hb_001634_080 Hb_000261_370--Hb_001634_080 Hb_016637_020 Hb_016637_020 Hb_000261_370--Hb_016637_020 Hb_000189_160 Hb_000189_160 Hb_003224_010--Hb_000189_160 Hb_003224_010--Hb_005496_170 Hb_003224_010--Hb_000046_430 Hb_094148_010 Hb_094148_010 Hb_003224_010--Hb_094148_010 Hb_009554_030 Hb_009554_030 Hb_003224_010--Hb_009554_030 Hb_002503_050 Hb_002503_050 Hb_003224_010--Hb_002503_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.444803 0.89159 0.222428 0 0.00498884
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0129503 0.0101912 0 0.513043 0.849582

CAGE analysis