Hb_004324_320

Information

Type -
Description -
Location Contig4324: 206999-209608
Sequence    

Annotation

kegg
ID rcu:RCOM_1581290
description ATP binding protein, putative
nr
ID XP_012090129.1
description PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
swissprot
ID Q9SUQ3
description Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=2 SV=1
trembl
ID A0A067JHA6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26014 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable inactive receptor kinase at4g23740

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42337: 207007-209946
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004324_320 0.0 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
2 Hb_170023_010 0.0566559229 - - hypothetical protein EUGRSUZ_C03837 [Eucalyptus grandis]
3 Hb_000147_020 0.0879580551 - - PREDICTED: uncharacterized protein LOC105638303 [Jatropha curcas]
4 Hb_000260_750 0.0879724985 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 7-like [Jatropha curcas]
5 Hb_000072_110 0.0999676654 - - PREDICTED: U-box domain-containing protein 35 [Jatropha curcas]
6 Hb_000880_040 0.1036132006 - - -
7 Hb_000365_440 0.1079798955 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
8 Hb_006970_120 0.1081921501 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000087_120 0.1124357403 - - AMP dependent CoA ligase, putative [Ricinus communis]
10 Hb_019278_010 0.1164875433 - - PREDICTED: uncharacterized protein LOC105638282 [Jatropha curcas]
11 Hb_000380_140 0.1168337747 - - PREDICTED: uncharacterized protein LOC105628069 [Jatropha curcas]
12 Hb_002701_060 0.1171126847 - - conserved hypothetical protein [Ricinus communis]
13 Hb_017098_050 0.1183729491 - - hypothetical protein POPTR_0001s03540g [Populus trichocarpa]
14 Hb_009102_010 0.1186637318 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_002601_140 0.1191096677 - - signal transducer, putative [Ricinus communis]
16 Hb_001244_070 0.1214586999 - - hypothetical protein POPTR_0004s13470g [Populus trichocarpa]
17 Hb_001186_120 0.1219557777 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Jatropha curcas]
18 Hb_000500_360 0.1221984084 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
19 Hb_007850_110 0.126409256 - - MADS-box transcription factor 3 [Hevea brasiliensis]
20 Hb_002379_060 0.1281814988 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]

Gene co-expression network

sample Hb_004324_320 Hb_004324_320 Hb_170023_010 Hb_170023_010 Hb_004324_320--Hb_170023_010 Hb_000147_020 Hb_000147_020 Hb_004324_320--Hb_000147_020 Hb_000260_750 Hb_000260_750 Hb_004324_320--Hb_000260_750 Hb_000072_110 Hb_000072_110 Hb_004324_320--Hb_000072_110 Hb_000880_040 Hb_000880_040 Hb_004324_320--Hb_000880_040 Hb_000365_440 Hb_000365_440 Hb_004324_320--Hb_000365_440 Hb_019278_010 Hb_019278_010 Hb_170023_010--Hb_019278_010 Hb_170023_010--Hb_000365_440 Hb_170023_010--Hb_000880_040 Hb_000087_120 Hb_000087_120 Hb_170023_010--Hb_000087_120 Hb_001244_070 Hb_001244_070 Hb_170023_010--Hb_001244_070 Hb_000500_360 Hb_000500_360 Hb_000147_020--Hb_000500_360 Hb_006970_120 Hb_006970_120 Hb_000147_020--Hb_006970_120 Hb_000147_020--Hb_000260_750 Hb_000640_330 Hb_000640_330 Hb_000147_020--Hb_000640_330 Hb_000380_140 Hb_000380_140 Hb_000147_020--Hb_000380_140 Hb_000260_750--Hb_000880_040 Hb_009102_010 Hb_009102_010 Hb_000260_750--Hb_009102_010 Hb_078582_010 Hb_078582_010 Hb_000260_750--Hb_078582_010 Hb_002601_140 Hb_002601_140 Hb_000260_750--Hb_002601_140 Hb_002078_320 Hb_002078_320 Hb_000260_750--Hb_002078_320 Hb_002701_060 Hb_002701_060 Hb_000072_110--Hb_002701_060 Hb_002701_170 Hb_002701_170 Hb_000072_110--Hb_002701_170 Hb_000072_110--Hb_170023_010 Hb_000072_110--Hb_006970_120 Hb_006053_020 Hb_006053_020 Hb_000072_110--Hb_006053_020 Hb_009693_010 Hb_009693_010 Hb_000880_040--Hb_009693_010 Hb_000880_040--Hb_000365_440 Hb_000880_040--Hb_001244_070 Hb_002851_070 Hb_002851_070 Hb_000880_040--Hb_002851_070 Hb_004709_030 Hb_004709_030 Hb_000365_440--Hb_004709_030 Hb_000365_440--Hb_001244_070 Hb_005050_030 Hb_005050_030 Hb_000365_440--Hb_005050_030 Hb_000365_440--Hb_019278_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0498539 1.92172 9.90747 4.46525 0 0.0078562
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0188644 0 0.0565227 8.37406 11.8469

CAGE analysis