Hb_006789_020

Information

Type -
Description -
Location Contig6789: 1382-19016
Sequence    

Annotation

kegg
ID egr:104427367
description wall-associated receptor kinase-like 5
nr
ID XP_010476711.1
description PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase-like 22 [Camelina sativa]
swissprot
ID -
description -
trembl
ID A5AKP6
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028339 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wall-associated receptor kinase-like 22

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006789_020 0.0 - - PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase-like 22 [Camelina sativa]
2 Hb_002701_170 0.0913860382 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
3 Hb_068804_030 0.0918244272 - - PREDICTED: uncharacterized protein LOC105639932 [Jatropha curcas]
4 Hb_002151_150 0.1218906868 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
5 Hb_002701_060 0.122489477 - - conserved hypothetical protein [Ricinus communis]
6 Hb_010678_010 0.1327174143 - - PREDICTED: alpha-glucosidase-like [Jatropha curcas]
7 Hb_026419_010 0.1366362082 - - PREDICTED: cyclin-D3-1-like [Jatropha curcas]
8 Hb_000072_110 0.1379264447 - - PREDICTED: U-box domain-containing protein 35 [Jatropha curcas]
9 Hb_000560_060 0.1394829639 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
10 Hb_119443_010 0.1402969731 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
11 Hb_006053_020 0.1432739606 - - CAP [Theobroma cacao]
12 Hb_000365_440 0.1566235131 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
13 Hb_024570_030 0.1591885754 - - cytochrome P450, putative [Ricinus communis]
14 Hb_004709_030 0.1605561629 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
15 Hb_004392_030 0.1609517794 - - oxidoreductase family protein [Populus trichocarpa]
16 Hb_002835_050 0.1614219908 - - PREDICTED: high-affinity nitrate transporter 3.1-like [Jatropha curcas]
17 Hb_005050_030 0.1618951663 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
18 Hb_000087_120 0.1646041833 - - AMP dependent CoA ligase, putative [Ricinus communis]
19 Hb_003030_050 0.1648876495 - - -
20 Hb_176680_010 0.1654757481 - - hypothetical protein JCGZ_22787 [Jatropha curcas]

Gene co-expression network

sample Hb_006789_020 Hb_006789_020 Hb_002701_170 Hb_002701_170 Hb_006789_020--Hb_002701_170 Hb_068804_030 Hb_068804_030 Hb_006789_020--Hb_068804_030 Hb_002151_150 Hb_002151_150 Hb_006789_020--Hb_002151_150 Hb_002701_060 Hb_002701_060 Hb_006789_020--Hb_002701_060 Hb_010678_010 Hb_010678_010 Hb_006789_020--Hb_010678_010 Hb_026419_010 Hb_026419_010 Hb_006789_020--Hb_026419_010 Hb_002701_170--Hb_002701_060 Hb_000560_060 Hb_000560_060 Hb_002701_170--Hb_000560_060 Hb_002701_170--Hb_010678_010 Hb_000072_110 Hb_000072_110 Hb_002701_170--Hb_000072_110 Hb_002701_170--Hb_002151_150 Hb_003030_050 Hb_003030_050 Hb_068804_030--Hb_003030_050 Hb_024570_030 Hb_024570_030 Hb_068804_030--Hb_024570_030 Hb_068804_030--Hb_002701_170 Hb_110737_010 Hb_110737_010 Hb_068804_030--Hb_110737_010 Hb_002835_050 Hb_002835_050 Hb_068804_030--Hb_002835_050 Hb_005050_030 Hb_005050_030 Hb_002151_150--Hb_005050_030 Hb_040718_010 Hb_040718_010 Hb_002151_150--Hb_040718_010 Hb_000365_440 Hb_000365_440 Hb_002151_150--Hb_000365_440 Hb_002151_150--Hb_000560_060 Hb_006053_020 Hb_006053_020 Hb_002701_060--Hb_006053_020 Hb_002701_060--Hb_000072_110 Hb_000574_010 Hb_000574_010 Hb_002701_060--Hb_000574_010 Hb_006970_120 Hb_006970_120 Hb_002701_060--Hb_006970_120 Hb_039435_020 Hb_039435_020 Hb_002701_060--Hb_039435_020 Hb_010678_010--Hb_000560_060 Hb_010678_010--Hb_000574_010 Hb_005622_030 Hb_005622_030 Hb_010678_010--Hb_005622_030 Hb_010678_010--Hb_002151_150 Hb_004837_250 Hb_004837_250 Hb_010678_010--Hb_004837_250 Hb_000226_110 Hb_000226_110 Hb_026419_010--Hb_000226_110 Hb_004709_030 Hb_004709_030 Hb_026419_010--Hb_004709_030 Hb_019278_010 Hb_019278_010 Hb_026419_010--Hb_019278_010 Hb_000087_120 Hb_000087_120 Hb_026419_010--Hb_000087_120 Hb_026419_010--Hb_000365_440 Hb_000230_020 Hb_000230_020 Hb_026419_010--Hb_000230_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0271986 0.00920101 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0251957 0.0443219

CAGE analysis