Hb_110737_010

Information

Type -
Description -
Location Contig110737: 3483-3942
Sequence    

Annotation

kegg
ID rcu:RCOM_0855170
description aldose-1-epimerase, putative (EC:5.1.3.3)
nr
ID XP_012083064.1
description PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LAJ3
description Aldose 1-epimerase OS=Jatropha curcas GN=JCGZ_09740 PE=3 SV=1
Gene Ontology
ID GO:0016853
description aldose 1-epimerase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03339: 3188-3309
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_110737_010 0.0 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
2 Hb_001109_170 0.0963064851 - - PREDICTED: urea-proton symporter DUR3 isoform X2 [Jatropha curcas]
3 Hb_003030_050 0.1002759366 - - -
4 Hb_000567_150 0.1010864084 - - cysteine protease, putative [Ricinus communis]
5 Hb_001369_270 0.1137953137 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_004487_060 0.1251691766 - - cytochrome P450, putative [Ricinus communis]
7 Hb_001288_050 0.1282870439 - - -
8 Hb_001005_040 0.1303921567 - - -
9 Hb_060152_010 0.1351387974 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
10 Hb_016835_020 0.1399027261 - - unnamed protein product [Coffea canephora]
11 Hb_000751_070 0.1407207159 - - -
12 Hb_002016_130 0.1476636569 desease resistance Gene Name: ABC_membrane multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
13 Hb_068804_030 0.1479919451 - - PREDICTED: uncharacterized protein LOC105639932 [Jatropha curcas]
14 Hb_000416_010 0.1494218792 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
15 Hb_097783_030 0.1527362669 - - PREDICTED: probable peroxidase 61 [Jatropha curcas]
16 Hb_000226_110 0.1535140552 - - -
17 Hb_003095_110 0.1547397518 - - GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
18 Hb_010311_020 0.1566073028 - - lrr receptor protein kinase, putative [Ricinus communis]
19 Hb_000237_120 0.1594049463 - - PREDICTED: beta-galactosidase 3-like [Jatropha curcas]
20 Hb_005155_030 0.1597049983 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]

Gene co-expression network

sample Hb_110737_010 Hb_110737_010 Hb_001109_170 Hb_001109_170 Hb_110737_010--Hb_001109_170 Hb_003030_050 Hb_003030_050 Hb_110737_010--Hb_003030_050 Hb_000567_150 Hb_000567_150 Hb_110737_010--Hb_000567_150 Hb_001369_270 Hb_001369_270 Hb_110737_010--Hb_001369_270 Hb_004487_060 Hb_004487_060 Hb_110737_010--Hb_004487_060 Hb_001288_050 Hb_001288_050 Hb_110737_010--Hb_001288_050 Hb_167211_010 Hb_167211_010 Hb_001109_170--Hb_167211_010 Hb_010311_020 Hb_010311_020 Hb_001109_170--Hb_010311_020 Hb_000416_010 Hb_000416_010 Hb_001109_170--Hb_000416_010 Hb_124579_020 Hb_124579_020 Hb_001109_170--Hb_124579_020 Hb_000054_130 Hb_000054_130 Hb_001109_170--Hb_000054_130 Hb_097783_030 Hb_097783_030 Hb_003030_050--Hb_097783_030 Hb_002835_050 Hb_002835_050 Hb_003030_050--Hb_002835_050 Hb_000907_130 Hb_000907_130 Hb_003030_050--Hb_000907_130 Hb_005155_030 Hb_005155_030 Hb_003030_050--Hb_005155_030 Hb_003030_050--Hb_001369_270 Hb_000567_150--Hb_001288_050 Hb_000751_070 Hb_000751_070 Hb_000567_150--Hb_000751_070 Hb_001005_040 Hb_001005_040 Hb_000567_150--Hb_001005_040 Hb_000567_150--Hb_001109_170 Hb_060152_010 Hb_060152_010 Hb_000567_150--Hb_060152_010 Hb_000226_110 Hb_000226_110 Hb_001369_270--Hb_000226_110 Hb_016835_020 Hb_016835_020 Hb_001369_270--Hb_016835_020 Hb_001369_270--Hb_060152_010 Hb_003858_080 Hb_003858_080 Hb_001369_270--Hb_003858_080 Hb_002016_130 Hb_002016_130 Hb_004487_060--Hb_002016_130 Hb_000574_030 Hb_000574_030 Hb_004487_060--Hb_000574_030 Hb_004487_060--Hb_001288_050 Hb_004487_060--Hb_001005_040 Hb_004487_060--Hb_000567_150 Hb_001288_050--Hb_001005_040 Hb_001288_050--Hb_000751_070 Hb_001597_090 Hb_001597_090 Hb_001288_050--Hb_001597_090 Hb_001571_020 Hb_001571_020 Hb_001288_050--Hb_001571_020 Hb_001288_050--Hb_002016_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.505891 7.68825 8.63895 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 19.2125 29.8524

CAGE analysis