Hb_000751_070

Information

Type -
Description -
Location Contig751: 97511-97855
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56850: 90656-98117
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000751_070 0.0 - - -
2 Hb_000567_150 0.0753871775 - - cysteine protease, putative [Ricinus communis]
3 Hb_146930_010 0.0940737974 - - -
4 Hb_060152_010 0.0949161341 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
5 Hb_000645_250 0.0984378534 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
6 Hb_000751_060 0.0997400765 - - PREDICTED: extensin-2-like, partial [Sesamum indicum]
7 Hb_001288_050 0.1001102343 - - -
8 Hb_000847_120 0.1059134832 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
9 Hb_001597_090 0.1263559715 - - -
10 Hb_168319_060 0.1347433478 - - PREDICTED: cytochrome P450 CYP749A22-like [Populus euphratica]
11 Hb_004943_010 0.1375204734 - - cationic amino acid transporter, putative [Ricinus communis]
12 Hb_008376_020 0.1380604735 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
13 Hb_000751_050 0.1395887397 - - PREDICTED: extensin, partial [Solanum lycopersicum]
14 Hb_025668_020 0.1401169192 - - conserved hypothetical protein [Ricinus communis]
15 Hb_110737_010 0.1407207159 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
16 Hb_002379_060 0.1412173151 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
17 Hb_007676_060 0.1426131733 - - PREDICTED: cellulose synthase-like protein E2 [Pyrus x bretschneideri]
18 Hb_000087_120 0.1491901162 - - AMP dependent CoA ligase, putative [Ricinus communis]
19 Hb_011576_010 0.1493405287 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
20 Hb_003095_110 0.1508791312 - - GTP-binding protein alpha subunit, gna, putative [Ricinus communis]

Gene co-expression network

sample Hb_000751_070 Hb_000751_070 Hb_000567_150 Hb_000567_150 Hb_000751_070--Hb_000567_150 Hb_146930_010 Hb_146930_010 Hb_000751_070--Hb_146930_010 Hb_060152_010 Hb_060152_010 Hb_000751_070--Hb_060152_010 Hb_000645_250 Hb_000645_250 Hb_000751_070--Hb_000645_250 Hb_000751_060 Hb_000751_060 Hb_000751_070--Hb_000751_060 Hb_001288_050 Hb_001288_050 Hb_000751_070--Hb_001288_050 Hb_000567_150--Hb_001288_050 Hb_110737_010 Hb_110737_010 Hb_000567_150--Hb_110737_010 Hb_001005_040 Hb_001005_040 Hb_000567_150--Hb_001005_040 Hb_001109_170 Hb_001109_170 Hb_000567_150--Hb_001109_170 Hb_000567_150--Hb_060152_010 Hb_000751_050 Hb_000751_050 Hb_146930_010--Hb_000751_050 Hb_001597_090 Hb_001597_090 Hb_146930_010--Hb_001597_090 Hb_146930_010--Hb_000751_060 Hb_146930_010--Hb_000645_250 Hb_007676_060 Hb_007676_060 Hb_146930_010--Hb_007676_060 Hb_060152_010--Hb_000751_060 Hb_168319_060 Hb_168319_060 Hb_060152_010--Hb_168319_060 Hb_060152_010--Hb_000645_250 Hb_001622_020 Hb_001622_020 Hb_060152_010--Hb_001622_020 Hb_000226_110 Hb_000226_110 Hb_060152_010--Hb_000226_110 Hb_000645_250--Hb_000751_060 Hb_000847_120 Hb_000847_120 Hb_000645_250--Hb_000847_120 Hb_008376_020 Hb_008376_020 Hb_000645_250--Hb_008376_020 Hb_000609_020 Hb_000609_020 Hb_000645_250--Hb_000609_020 Hb_000751_060--Hb_168319_060 Hb_000751_060--Hb_000847_120 Hb_001288_050--Hb_001005_040 Hb_001288_050--Hb_001597_090 Hb_001571_020 Hb_001571_020 Hb_001288_050--Hb_001571_020 Hb_002016_130 Hb_002016_130 Hb_001288_050--Hb_002016_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.203421 0.74365 1.06122 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.11785 2.46142

CAGE analysis