Hb_001622_020

Information

Type -
Description -
Location Contig1622: 24394-25703
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001622_020 0.0 - - -
2 Hb_000054_130 0.059456166 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
3 Hb_001778_040 0.0690428657 - - hypothetical protein VITISV_021035 [Vitis vinifera]
4 Hb_000254_060 0.0783087449 - - conserved hypothetical protein [Ricinus communis]
5 Hb_167211_010 0.0953744656 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
6 Hb_060152_010 0.1029263605 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
7 Hb_168319_060 0.1147785888 - - PREDICTED: cytochrome P450 CYP749A22-like [Populus euphratica]
8 Hb_181463_020 0.1155781892 - - hypothetical protein JCGZ_26765 [Jatropha curcas]
9 Hb_000237_120 0.1183779817 - - PREDICTED: beta-galactosidase 3-like [Jatropha curcas]
10 Hb_001109_170 0.1199618959 - - PREDICTED: urea-proton symporter DUR3 isoform X2 [Jatropha curcas]
11 Hb_005332_050 0.1343147736 - - hypothetical protein POPTR_0017s10650g [Populus trichocarpa]
12 Hb_000751_060 0.1407900241 - - PREDICTED: extensin-2-like, partial [Sesamum indicum]
13 Hb_003992_220 0.14156278 - - s-receptor kinase, putative [Ricinus communis]
14 Hb_065521_010 0.1464957877 - - PREDICTED: probable metal-nicotianamine transporter YSL5 [Jatropha curcas]
15 Hb_004162_140 0.1505378339 - - PREDICTED: serine carboxypeptidase-like 51 [Jatropha curcas]
16 Hb_001369_270 0.1507168307 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
17 Hb_003858_080 0.1507352988 - - Germin-like protein 2 [Theobroma cacao]
18 Hb_006594_080 0.1524790213 - - beta-glucosidase, putative [Ricinus communis]
19 Hb_000009_430 0.1553763249 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001629_050 0.1570887438 - - structural constituent of cell wall, putative [Ricinus communis]

Gene co-expression network

sample Hb_001622_020 Hb_001622_020 Hb_000054_130 Hb_000054_130 Hb_001622_020--Hb_000054_130 Hb_001778_040 Hb_001778_040 Hb_001622_020--Hb_001778_040 Hb_000254_060 Hb_000254_060 Hb_001622_020--Hb_000254_060 Hb_167211_010 Hb_167211_010 Hb_001622_020--Hb_167211_010 Hb_060152_010 Hb_060152_010 Hb_001622_020--Hb_060152_010 Hb_168319_060 Hb_168319_060 Hb_001622_020--Hb_168319_060 Hb_000054_130--Hb_167211_010 Hb_000054_130--Hb_001778_040 Hb_181463_020 Hb_181463_020 Hb_000054_130--Hb_181463_020 Hb_001109_170 Hb_001109_170 Hb_000054_130--Hb_001109_170 Hb_000237_120 Hb_000237_120 Hb_000054_130--Hb_000237_120 Hb_001778_040--Hb_167211_010 Hb_001778_040--Hb_000254_060 Hb_003992_220 Hb_003992_220 Hb_001778_040--Hb_003992_220 Hb_001629_050 Hb_001629_050 Hb_001778_040--Hb_001629_050 Hb_000254_060--Hb_168319_060 Hb_065521_010 Hb_065521_010 Hb_000254_060--Hb_065521_010 Hb_029510_090 Hb_029510_090 Hb_000254_060--Hb_029510_090 Hb_000254_060--Hb_000054_130 Hb_167211_010--Hb_001109_170 Hb_124579_020 Hb_124579_020 Hb_167211_010--Hb_124579_020 Hb_005332_050 Hb_005332_050 Hb_167211_010--Hb_005332_050 Hb_000751_060 Hb_000751_060 Hb_060152_010--Hb_000751_060 Hb_060152_010--Hb_168319_060 Hb_000751_070 Hb_000751_070 Hb_060152_010--Hb_000751_070 Hb_000645_250 Hb_000645_250 Hb_060152_010--Hb_000645_250 Hb_000226_110 Hb_000226_110 Hb_060152_010--Hb_000226_110 Hb_007875_020 Hb_007875_020 Hb_168319_060--Hb_007875_020 Hb_168319_060--Hb_065521_010 Hb_004943_010 Hb_004943_010 Hb_168319_060--Hb_004943_010 Hb_168319_060--Hb_029510_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.357277 0.732013 2.51677 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.56581 3.37322

CAGE analysis