Hb_001109_170

Information

Type -
Description -
Location Contig1109: 295050-302756
Sequence    

Annotation

kegg
ID gmx:100784391
description urea-proton symporter DUR3-like
nr
ID XP_012075062.1
description PREDICTED: urea-proton symporter DUR3 isoform X2 [Jatropha curcas]
swissprot
ID F4KD71
description Urea-proton symporter DUR3 OS=Arabidopsis thaliana GN=DUR3 PE=1 SV=1
trembl
ID A0A067KT08
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10798 PE=3 SV=1
Gene Ontology
ID GO:0016021
description urea-proton symporter dur3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03368: 295073-302648
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001109_170 0.0 - - PREDICTED: urea-proton symporter DUR3 isoform X2 [Jatropha curcas]
2 Hb_167211_010 0.0932233055 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
3 Hb_110737_010 0.0963064851 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
4 Hb_010311_020 0.10098575 - - lrr receptor protein kinase, putative [Ricinus communis]
5 Hb_000416_010 0.1036233296 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
6 Hb_124579_020 0.1073547168 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]
7 Hb_000054_130 0.1111236287 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
8 Hb_181463_020 0.1114054209 - - hypothetical protein JCGZ_26765 [Jatropha curcas]
9 Hb_000567_150 0.1161326743 - - cysteine protease, putative [Ricinus communis]
10 Hb_000237_120 0.1183189452 - - PREDICTED: beta-galactosidase 3-like [Jatropha curcas]
11 Hb_001005_040 0.1185675764 - - -
12 Hb_001622_020 0.1199618959 - - -
13 Hb_060152_010 0.1322582668 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
14 Hb_003992_220 0.1346189444 - - s-receptor kinase, putative [Ricinus communis]
15 Hb_017225_030 0.1366633752 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
16 Hb_001288_050 0.1391558345 - - -
17 Hb_006594_080 0.142237236 - - beta-glucosidase, putative [Ricinus communis]
18 Hb_001369_270 0.1435554333 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
19 Hb_029727_010 0.1441883305 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_185474_020 0.1453161072 - - hypothetical protein JCGZ_06105 [Jatropha curcas]

Gene co-expression network

sample Hb_001109_170 Hb_001109_170 Hb_167211_010 Hb_167211_010 Hb_001109_170--Hb_167211_010 Hb_110737_010 Hb_110737_010 Hb_001109_170--Hb_110737_010 Hb_010311_020 Hb_010311_020 Hb_001109_170--Hb_010311_020 Hb_000416_010 Hb_000416_010 Hb_001109_170--Hb_000416_010 Hb_124579_020 Hb_124579_020 Hb_001109_170--Hb_124579_020 Hb_000054_130 Hb_000054_130 Hb_001109_170--Hb_000054_130 Hb_167211_010--Hb_000054_130 Hb_001778_040 Hb_001778_040 Hb_167211_010--Hb_001778_040 Hb_001622_020 Hb_001622_020 Hb_167211_010--Hb_001622_020 Hb_167211_010--Hb_124579_020 Hb_005332_050 Hb_005332_050 Hb_167211_010--Hb_005332_050 Hb_003030_050 Hb_003030_050 Hb_110737_010--Hb_003030_050 Hb_000567_150 Hb_000567_150 Hb_110737_010--Hb_000567_150 Hb_001369_270 Hb_001369_270 Hb_110737_010--Hb_001369_270 Hb_004487_060 Hb_004487_060 Hb_110737_010--Hb_004487_060 Hb_001288_050 Hb_001288_050 Hb_110737_010--Hb_001288_050 Hb_010311_020--Hb_000416_010 Hb_010311_020--Hb_124579_020 Hb_185474_020 Hb_185474_020 Hb_010311_020--Hb_185474_020 Hb_000380_140 Hb_000380_140 Hb_010311_020--Hb_000380_140 Hb_002635_010 Hb_002635_010 Hb_010311_020--Hb_002635_010 Hb_006198_040 Hb_006198_040 Hb_010311_020--Hb_006198_040 Hb_000416_010--Hb_124579_020 Hb_000416_010--Hb_185474_020 Hb_001301_010 Hb_001301_010 Hb_000416_010--Hb_001301_010 Hb_000776_020 Hb_000776_020 Hb_000416_010--Hb_000776_020 Hb_000130_480 Hb_000130_480 Hb_124579_020--Hb_000130_480 Hb_124579_020--Hb_185474_020 Hb_003142_080 Hb_003142_080 Hb_124579_020--Hb_003142_080 Hb_124579_020--Hb_002635_010 Hb_000054_130--Hb_001622_020 Hb_000054_130--Hb_001778_040 Hb_181463_020 Hb_181463_020 Hb_000054_130--Hb_181463_020 Hb_000237_120 Hb_000237_120 Hb_000054_130--Hb_000237_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.30507 4.10139 6.86852 0 0.0151727
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0189258 0 0 10.283 18.712

CAGE analysis