Hb_000054_130

Information

Type -
Description -
Location Contig54: 205434-206093
Sequence    

Annotation

kegg
ID egr:104423305
description uncharacterized LOC104423305
nr
ID KDP29625.1
description hypothetical protein JCGZ_18787 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBJ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18787 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47791: 205963-206271
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000054_130 0.0 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
2 Hb_001622_020 0.059456166 - - -
3 Hb_167211_010 0.0783442071 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
4 Hb_001778_040 0.0806819903 - - hypothetical protein VITISV_021035 [Vitis vinifera]
5 Hb_181463_020 0.0948162035 - - hypothetical protein JCGZ_26765 [Jatropha curcas]
6 Hb_001109_170 0.1111236287 - - PREDICTED: urea-proton symporter DUR3 isoform X2 [Jatropha curcas]
7 Hb_000237_120 0.1207596514 - - PREDICTED: beta-galactosidase 3-like [Jatropha curcas]
8 Hb_000254_060 0.1216144843 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001629_050 0.1240610354 - - structural constituent of cell wall, putative [Ricinus communis]
10 Hb_005332_050 0.1343925112 - - hypothetical protein POPTR_0017s10650g [Populus trichocarpa]
11 Hb_001248_140 0.1388071828 - - Thylakoid lumenal 19 kDa protein, chloroplast precursor, putative [Ricinus communis]
12 Hb_003992_220 0.1426264846 - - s-receptor kinase, putative [Ricinus communis]
13 Hb_032143_010 0.1441581127 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
14 Hb_000309_070 0.146639273 - - PREDICTED: 2-methylene-furan-3-one reductase [Cucumis melo]
15 Hb_000392_490 0.1466841727 - - PREDICTED: uncharacterized protein LOC105640495 isoform X1 [Jatropha curcas]
16 Hb_006807_010 0.1472219595 - - hypothetical protein JCGZ_20881 [Jatropha curcas]
17 Hb_060152_010 0.1511920506 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
18 Hb_006594_080 0.1523807904 - - beta-glucosidase, putative [Ricinus communis]
19 Hb_010311_020 0.1583004238 - - lrr receptor protein kinase, putative [Ricinus communis]
20 Hb_003714_030 0.1587332777 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]

Gene co-expression network

sample Hb_000054_130 Hb_000054_130 Hb_001622_020 Hb_001622_020 Hb_000054_130--Hb_001622_020 Hb_167211_010 Hb_167211_010 Hb_000054_130--Hb_167211_010 Hb_001778_040 Hb_001778_040 Hb_000054_130--Hb_001778_040 Hb_181463_020 Hb_181463_020 Hb_000054_130--Hb_181463_020 Hb_001109_170 Hb_001109_170 Hb_000054_130--Hb_001109_170 Hb_000237_120 Hb_000237_120 Hb_000054_130--Hb_000237_120 Hb_001622_020--Hb_001778_040 Hb_000254_060 Hb_000254_060 Hb_001622_020--Hb_000254_060 Hb_001622_020--Hb_167211_010 Hb_060152_010 Hb_060152_010 Hb_001622_020--Hb_060152_010 Hb_168319_060 Hb_168319_060 Hb_001622_020--Hb_168319_060 Hb_167211_010--Hb_001778_040 Hb_167211_010--Hb_001109_170 Hb_124579_020 Hb_124579_020 Hb_167211_010--Hb_124579_020 Hb_005332_050 Hb_005332_050 Hb_167211_010--Hb_005332_050 Hb_001778_040--Hb_000254_060 Hb_003992_220 Hb_003992_220 Hb_001778_040--Hb_003992_220 Hb_001629_050 Hb_001629_050 Hb_001778_040--Hb_001629_050 Hb_181463_020--Hb_000237_120 Hb_181463_020--Hb_001109_170 Hb_181463_020--Hb_001622_020 Hb_032143_010 Hb_032143_010 Hb_181463_020--Hb_032143_010 Hb_181463_020--Hb_167211_010 Hb_110737_010 Hb_110737_010 Hb_001109_170--Hb_110737_010 Hb_010311_020 Hb_010311_020 Hb_001109_170--Hb_010311_020 Hb_000416_010 Hb_000416_010 Hb_001109_170--Hb_000416_010 Hb_001109_170--Hb_124579_020 Hb_006142_050 Hb_006142_050 Hb_000237_120--Hb_006142_050 Hb_000237_120--Hb_167211_010 Hb_000237_120--Hb_001109_170 Hb_000237_120--Hb_001622_020 Hb_000237_120--Hb_032143_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.071418 0.113378 0.440404 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.371166 0.689014

CAGE analysis