Hb_000416_010

Information

Type -
Description -
Location Contig416: 30240-32650
Sequence    

Annotation

kegg
ID pop:POPTR_0004s06050g
description POPTRDRAFT_855146; hypothetical protein
nr
ID XP_012091837.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
swissprot
ID Q9FLV4
description G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1
trembl
ID A0A067JEE7
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_21614 PE=3 SV=1
Gene Ontology
ID GO:0016301
description g-type lectin s-receptor-like serine threonine-protein kinase sd2-5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000416_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
2 Hb_010311_020 0.0531393545 - - lrr receptor protein kinase, putative [Ricinus communis]
3 Hb_124579_020 0.085429403 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]
4 Hb_185474_020 0.0942514079 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
5 Hb_001301_010 0.0944323858 - - receptor protein kinase, putative [Ricinus communis]
6 Hb_001109_170 0.1036233296 - - PREDICTED: urea-proton symporter DUR3 isoform X2 [Jatropha curcas]
7 Hb_000776_020 0.1045718347 transcription factor TF Family: M-type hypothetical protein JCGZ_25594 [Jatropha curcas]
8 Hb_039435_020 0.111716273 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
9 Hb_001005_040 0.1164381585 - - -
10 Hb_001652_130 0.118812884 - - hypothetical protein B456_002G193900 [Gossypium raimondii]
11 Hb_000380_140 0.1196333133 - - PREDICTED: uncharacterized protein LOC105628069 [Jatropha curcas]
12 Hb_003142_080 0.1261325768 - - receptor serine/threonine kinase, putative [Ricinus communis]
13 Hb_002635_010 0.1296216926 - - homogentisate phytyl transferase [Hevea brasiliensis]
14 Hb_002122_070 0.1306549516 - - unnamed protein product [Vitis vinifera]
15 Hb_006198_040 0.1307088216 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002016_130 0.1318137158 desease resistance Gene Name: ABC_membrane multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
17 Hb_167211_010 0.1319893002 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
18 Hb_006970_120 0.1353522241 - - conserved hypothetical protein [Ricinus communis]
19 Hb_017225_030 0.1358859648 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
20 Hb_000147_020 0.1396819016 - - PREDICTED: uncharacterized protein LOC105638303 [Jatropha curcas]

Gene co-expression network

sample Hb_000416_010 Hb_000416_010 Hb_010311_020 Hb_010311_020 Hb_000416_010--Hb_010311_020 Hb_124579_020 Hb_124579_020 Hb_000416_010--Hb_124579_020 Hb_185474_020 Hb_185474_020 Hb_000416_010--Hb_185474_020 Hb_001301_010 Hb_001301_010 Hb_000416_010--Hb_001301_010 Hb_001109_170 Hb_001109_170 Hb_000416_010--Hb_001109_170 Hb_000776_020 Hb_000776_020 Hb_000416_010--Hb_000776_020 Hb_010311_020--Hb_124579_020 Hb_010311_020--Hb_185474_020 Hb_000380_140 Hb_000380_140 Hb_010311_020--Hb_000380_140 Hb_002635_010 Hb_002635_010 Hb_010311_020--Hb_002635_010 Hb_006198_040 Hb_006198_040 Hb_010311_020--Hb_006198_040 Hb_000130_480 Hb_000130_480 Hb_124579_020--Hb_000130_480 Hb_124579_020--Hb_185474_020 Hb_003142_080 Hb_003142_080 Hb_124579_020--Hb_003142_080 Hb_124579_020--Hb_002635_010 Hb_185474_020--Hb_003142_080 Hb_185474_020--Hb_006198_040 Hb_185474_020--Hb_000380_140 Hb_001652_130 Hb_001652_130 Hb_185474_020--Hb_001652_130 Hb_001301_010--Hb_000776_020 Hb_002845_020 Hb_002845_020 Hb_001301_010--Hb_002845_020 Hb_000442_170 Hb_000442_170 Hb_001301_010--Hb_000442_170 Hb_001866_100 Hb_001866_100 Hb_001301_010--Hb_001866_100 Hb_007205_020 Hb_007205_020 Hb_001301_010--Hb_007205_020 Hb_167211_010 Hb_167211_010 Hb_001109_170--Hb_167211_010 Hb_110737_010 Hb_110737_010 Hb_001109_170--Hb_110737_010 Hb_001109_170--Hb_010311_020 Hb_001109_170--Hb_124579_020 Hb_000054_130 Hb_000054_130 Hb_001109_170--Hb_000054_130 Hb_007850_110 Hb_007850_110 Hb_000776_020--Hb_007850_110 Hb_017098_050 Hb_017098_050 Hb_000776_020--Hb_017098_050 Hb_000776_020--Hb_000442_170 Hb_001109_130 Hb_001109_130 Hb_000776_020--Hb_001109_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.041125 0.0992729 0.0810733 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.146385 0.325552

CAGE analysis