Hb_004487_060

Information

Type -
Description -
Location Contig4487: 82605-84845
Sequence    

Annotation

kegg
ID rcu:RCOM_1588260
description cytochrome P450, putative (EC:1.14.13.89)
nr
ID XP_002510130.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID P93147
description Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2
trembl
ID B9R737
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1588260 PE=3 SV=1
Gene Ontology
ID GO:0005506
description isoflavone 2 -hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43106: 82637-84600
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004487_060 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_002016_130 0.1055194992 desease resistance Gene Name: ABC_membrane multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
3 Hb_110737_010 0.1251691766 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
4 Hb_000574_030 0.1260426195 desease resistance Gene Name: Glyco_hydro_38 Disease resistance protein RPS5, putative [Ricinus communis]
5 Hb_001288_050 0.133625849 - - -
6 Hb_001005_040 0.1336417818 - - -
7 Hb_000567_150 0.148189023 - - cysteine protease, putative [Ricinus communis]
8 Hb_002876_100 0.1603474759 - - hypothetical protein POPTR_0019s11600g [Populus trichocarpa]
9 Hb_003030_050 0.1613746746 - - -
10 Hb_068804_030 0.1645130225 - - PREDICTED: uncharacterized protein LOC105639932 [Jatropha curcas]
11 Hb_003095_110 0.1686550514 - - GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
12 Hb_010129_020 0.1707415558 - - cytochrome P450, putative [Ricinus communis]
13 Hb_000230_020 0.1729077504 - - cysteine synthase, putative [Ricinus communis]
14 Hb_000906_120 0.1738079395 - - hypothetical protein VITISV_006406 [Vitis vinifera]
15 Hb_089299_010 0.1752034662 - - conserved hypothetical protein [Ricinus communis]
16 Hb_006415_010 0.1759498441 - - -
17 Hb_011576_010 0.1779477149 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
18 Hb_001571_020 0.1805411386 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Citrus sinensis]
19 Hb_002529_070 0.1825351662 - - PREDICTED: putative late blight resistance protein homolog R1B-19 [Pyrus x bretschneideri]
20 Hb_002188_050 0.1827970042 - - PREDICTED: serine carboxypeptidase-like 2 [Jatropha curcas]

Gene co-expression network

sample Hb_004487_060 Hb_004487_060 Hb_002016_130 Hb_002016_130 Hb_004487_060--Hb_002016_130 Hb_110737_010 Hb_110737_010 Hb_004487_060--Hb_110737_010 Hb_000574_030 Hb_000574_030 Hb_004487_060--Hb_000574_030 Hb_001288_050 Hb_001288_050 Hb_004487_060--Hb_001288_050 Hb_001005_040 Hb_001005_040 Hb_004487_060--Hb_001005_040 Hb_000567_150 Hb_000567_150 Hb_004487_060--Hb_000567_150 Hb_002016_130--Hb_001005_040 Hb_002016_130--Hb_000574_030 Hb_002016_130--Hb_001288_050 Hb_000416_010 Hb_000416_010 Hb_002016_130--Hb_000416_010 Hb_001301_010 Hb_001301_010 Hb_002016_130--Hb_001301_010 Hb_001109_170 Hb_001109_170 Hb_110737_010--Hb_001109_170 Hb_003030_050 Hb_003030_050 Hb_110737_010--Hb_003030_050 Hb_110737_010--Hb_000567_150 Hb_001369_270 Hb_001369_270 Hb_110737_010--Hb_001369_270 Hb_110737_010--Hb_001288_050 Hb_000574_030--Hb_001005_040 Hb_009848_060 Hb_009848_060 Hb_000574_030--Hb_009848_060 Hb_000574_030--Hb_001288_050 Hb_020831_070 Hb_020831_070 Hb_000574_030--Hb_020831_070 Hb_001288_050--Hb_000567_150 Hb_001288_050--Hb_001005_040 Hb_000751_070 Hb_000751_070 Hb_001288_050--Hb_000751_070 Hb_001597_090 Hb_001597_090 Hb_001288_050--Hb_001597_090 Hb_001571_020 Hb_001571_020 Hb_001288_050--Hb_001571_020 Hb_029727_010 Hb_029727_010 Hb_001005_040--Hb_029727_010 Hb_001005_040--Hb_000567_150 Hb_001005_040--Hb_000416_010 Hb_001005_040--Hb_001109_170 Hb_000567_150--Hb_000751_070 Hb_000567_150--Hb_001109_170 Hb_060152_010 Hb_060152_010 Hb_000567_150--Hb_060152_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.151904 1.74857 31.6111 13.4896 0 0.0122919
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0566335 0.0222785 0.0419873 89.4145 132.863

CAGE analysis