Hb_010678_010

Information

Type -
Description -
Location Contig10678: 33701-42496
Sequence    

Annotation

kegg
ID rcu:RCOM_0252330
description alpha-glucosidase, putative (EC:3.2.1.20)
nr
ID XP_012075558.1
description PREDICTED: alpha-glucosidase-like [Jatropha curcas]
swissprot
ID O04893
description Alpha-glucosidase OS=Spinacia oleracea PE=1 SV=1
trembl
ID A0A067KSS5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09182 PE=3 SV=1
Gene Ontology
ID GO:0004558
description glycosyl hydrolases family 31 protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02094: 33729-42440
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010678_010 0.0 - - PREDICTED: alpha-glucosidase-like [Jatropha curcas]
2 Hb_002701_170 0.0937613777 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
3 Hb_000560_060 0.1083132227 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
4 Hb_000574_010 0.1128238118 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06096 [Jatropha curcas]
5 Hb_005622_030 0.12096773 - - transferase, putative [Ricinus communis]
6 Hb_002151_150 0.1221351918 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
7 Hb_004837_250 0.1236154674 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002701_060 0.1260013578 - - conserved hypothetical protein [Ricinus communis]
9 Hb_006789_020 0.1327174143 - - PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase-like 22 [Camelina sativa]
10 Hb_005050_030 0.1388625626 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
11 Hb_040718_010 0.1539945038 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
12 Hb_005575_010 0.1540604117 - - hypothetical protein POPTR_0004s02560g [Populus trichocarpa]
13 Hb_176680_010 0.1594759702 - - hypothetical protein JCGZ_22787 [Jatropha curcas]
14 Hb_004374_020 0.1626190453 - - PREDICTED: mitogen-activated protein kinase homolog MMK2-like [Jatropha curcas]
15 Hb_002025_290 0.1672494037 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]
16 Hb_001285_020 0.1673140605 - - UDP-glucosyltransferase, putative [Ricinus communis]
17 Hb_006053_020 0.1676106803 - - CAP [Theobroma cacao]
18 Hb_000072_110 0.1694223682 - - PREDICTED: U-box domain-containing protein 35 [Jatropha curcas]
19 Hb_000947_010 0.1696658475 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
20 Hb_000365_440 0.1730698774 - - Acid phosphatase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_010678_010 Hb_010678_010 Hb_002701_170 Hb_002701_170 Hb_010678_010--Hb_002701_170 Hb_000560_060 Hb_000560_060 Hb_010678_010--Hb_000560_060 Hb_000574_010 Hb_000574_010 Hb_010678_010--Hb_000574_010 Hb_005622_030 Hb_005622_030 Hb_010678_010--Hb_005622_030 Hb_002151_150 Hb_002151_150 Hb_010678_010--Hb_002151_150 Hb_004837_250 Hb_004837_250 Hb_010678_010--Hb_004837_250 Hb_002701_060 Hb_002701_060 Hb_002701_170--Hb_002701_060 Hb_002701_170--Hb_000560_060 Hb_006789_020 Hb_006789_020 Hb_002701_170--Hb_006789_020 Hb_000072_110 Hb_000072_110 Hb_002701_170--Hb_000072_110 Hb_002701_170--Hb_002151_150 Hb_000560_060--Hb_002151_150 Hb_000560_060--Hb_000072_110 Hb_005050_030 Hb_005050_030 Hb_000560_060--Hb_005050_030 Hb_000560_060--Hb_002701_060 Hb_000574_010--Hb_002701_060 Hb_008143_010 Hb_008143_010 Hb_000574_010--Hb_008143_010 Hb_005575_010 Hb_005575_010 Hb_000574_010--Hb_005575_010 Hb_006053_020 Hb_006053_020 Hb_000574_010--Hb_006053_020 Hb_015978_090 Hb_015978_090 Hb_000574_010--Hb_015978_090 Hb_040718_010 Hb_040718_010 Hb_005622_030--Hb_040718_010 Hb_005622_030--Hb_002151_150 Hb_005622_030--Hb_005050_030 Hb_005622_030--Hb_000560_060 Hb_000755_090 Hb_000755_090 Hb_005622_030--Hb_000755_090 Hb_002151_150--Hb_005050_030 Hb_002151_150--Hb_040718_010 Hb_000365_440 Hb_000365_440 Hb_002151_150--Hb_000365_440 Hb_002151_150--Hb_006789_020 Hb_176680_010 Hb_176680_010 Hb_004837_250--Hb_176680_010 Hb_004837_250--Hb_000574_010 Hb_023732_080 Hb_023732_080 Hb_004837_250--Hb_023732_080 Hb_004837_250--Hb_002701_170 Hb_006938_060 Hb_006938_060 Hb_004837_250--Hb_006938_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00654589 0.116444 10.2696 1.47328 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.014845 0 0 4.60148 11.2613

CAGE analysis