Hb_005622_030

Information

Type -
Description -
Location Contig5622: 40887-41501
Sequence    

Annotation

kegg
ID rcu:RCOM_1574330
description transferase, putative (EC:2.3.1.150)
nr
ID XP_002513338.1
description transferase, putative [Ricinus communis]
swissprot
ID Q6TXD2
description Pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase OS=Salvia splendens PE=1 SV=1
trembl
ID B9RHW9
description Transferase, putative OS=Ricinus communis GN=RCOM_1574330 PE=4 SV=1
Gene Ontology
ID GO:0016747
description 3 -n-debenzoyl-2 -deoxytaxol n-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005622_030 0.0 - - transferase, putative [Ricinus communis]
2 Hb_010678_010 0.12096773 - - PREDICTED: alpha-glucosidase-like [Jatropha curcas]
3 Hb_040718_010 0.1363874896 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
4 Hb_002151_150 0.1400377746 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
5 Hb_005050_030 0.1570958648 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
6 Hb_000560_060 0.1643518728 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
7 Hb_000755_090 0.1652365978 - - transferase, putative [Ricinus communis]
8 Hb_001369_460 0.1658112391 - - vacuolar invertase [Manihot esculenta]
9 Hb_002025_290 0.1658986999 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]
10 Hb_004837_250 0.1737121872 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000649_260 0.177743926 - - uncharacterized LOC105634108 [Jatropha curcas]
12 Hb_006938_060 0.1793781063 - - nutrient reservoir, putative [Ricinus communis]
13 Hb_145188_010 0.1799148435 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
14 Hb_002701_170 0.1807431928 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
15 Hb_001476_040 0.1829046511 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
16 Hb_005575_010 0.1853532307 - - hypothetical protein POPTR_0004s02560g [Populus trichocarpa]
17 Hb_028707_120 0.190961588 - - PREDICTED: uncharacterized protein LOC105645799 isoform X2 [Jatropha curcas]
18 Hb_000947_010 0.1917073188 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
19 Hb_001285_020 0.192539711 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_152180_010 0.1971799438 - - Blue copper protein precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_005622_030 Hb_005622_030 Hb_010678_010 Hb_010678_010 Hb_005622_030--Hb_010678_010 Hb_040718_010 Hb_040718_010 Hb_005622_030--Hb_040718_010 Hb_002151_150 Hb_002151_150 Hb_005622_030--Hb_002151_150 Hb_005050_030 Hb_005050_030 Hb_005622_030--Hb_005050_030 Hb_000560_060 Hb_000560_060 Hb_005622_030--Hb_000560_060 Hb_000755_090 Hb_000755_090 Hb_005622_030--Hb_000755_090 Hb_002701_170 Hb_002701_170 Hb_010678_010--Hb_002701_170 Hb_010678_010--Hb_000560_060 Hb_000574_010 Hb_000574_010 Hb_010678_010--Hb_000574_010 Hb_010678_010--Hb_002151_150 Hb_004837_250 Hb_004837_250 Hb_010678_010--Hb_004837_250 Hb_006938_060 Hb_006938_060 Hb_040718_010--Hb_006938_060 Hb_040718_010--Hb_005050_030 Hb_001369_460 Hb_001369_460 Hb_040718_010--Hb_001369_460 Hb_040718_010--Hb_002151_150 Hb_174168_010 Hb_174168_010 Hb_040718_010--Hb_174168_010 Hb_000947_010 Hb_000947_010 Hb_040718_010--Hb_000947_010 Hb_002151_150--Hb_005050_030 Hb_002151_150--Hb_002701_170 Hb_000365_440 Hb_000365_440 Hb_002151_150--Hb_000365_440 Hb_002151_150--Hb_000560_060 Hb_006789_020 Hb_006789_020 Hb_002151_150--Hb_006789_020 Hb_005050_030--Hb_000365_440 Hb_005050_030--Hb_002701_170 Hb_005050_030--Hb_000947_010 Hb_009693_010 Hb_009693_010 Hb_005050_030--Hb_009693_010 Hb_000560_060--Hb_002701_170 Hb_000072_110 Hb_000072_110 Hb_000560_060--Hb_000072_110 Hb_000560_060--Hb_005050_030 Hb_002701_060 Hb_002701_060 Hb_000560_060--Hb_002701_060 Hb_024948_010 Hb_024948_010 Hb_000755_090--Hb_024948_010 Hb_020273_010 Hb_020273_010 Hb_000755_090--Hb_020273_010 Hb_012813_020 Hb_012813_020 Hb_000755_090--Hb_012813_020 Hb_002217_060 Hb_002217_060 Hb_000755_090--Hb_002217_060 Hb_027556_070 Hb_027556_070 Hb_000755_090--Hb_027556_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.93547 0.170281 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.626675 1.18921

CAGE analysis