Hb_000184_010

Information

Type -
Description -
Location Contig184: 10925-13023
Sequence    

Annotation

kegg
ID rcu:RCOM_0304730
description mutt domain protein, putative (EC:3.6.1.22)
nr
ID XP_002534364.1
description mutt domain protein, putative [Ricinus communis]
swissprot
ID Q94B74
description Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1
trembl
ID B9T7Z5
description Mutt domain protein, putative OS=Ricinus communis GN=RCOM_0304730 PE=3 SV=1
Gene Ontology
ID GO:0016787
description nudix hydrolase 2-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000184_010 0.0 - - mutt domain protein, putative [Ricinus communis]
2 Hb_002641_020 0.1057676555 - - 3'-5' exonuclease, putative [Ricinus communis]
3 Hb_001488_250 0.1404107539 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005000_110 0.150227277 - - PREDICTED: uncharacterized protein LOC105637872 isoform X1 [Jatropha curcas]
5 Hb_002272_210 0.1542232036 - - PREDICTED: UPF0603 protein At1g54780, chloroplastic [Jatropha curcas]
6 Hb_000329_500 0.1549369777 - - PREDICTED: uncharacterized protein LOC105643180 isoform X1 [Jatropha curcas]
7 Hb_001159_050 0.1577302817 - - PREDICTED: uncharacterized protein LOC105645952 [Jatropha curcas]
8 Hb_008707_040 0.1579277241 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000530_040 0.159861444 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG2 isoform X1 [Jatropha curcas]
10 Hb_007597_030 0.1623987161 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_001343_030 0.1633699295 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Jatropha curcas]
12 Hb_000413_190 0.1638731671 - - PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Pyrus x bretschneideri]
13 Hb_001424_010 0.1641436671 - - serine/threonine protein kinase, putative [Ricinus communis]
14 Hb_000697_030 0.1661818322 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Pyrus x bretschneideri]
15 Hb_000088_230 0.1667009794 - - hypothetical protein POPTR_0013s11340g [Populus trichocarpa]
16 Hb_004306_090 0.1673343002 - - PREDICTED: uncharacterized protein LOC105644392 isoform X2 [Jatropha curcas]
17 Hb_000025_700 0.1676431318 - - PREDICTED: serine--glyoxylate aminotransferase [Nelumbo nucifera]
18 Hb_001975_120 0.1684299549 - - chlorophyll a/b binding protein type II [Glycine max]
19 Hb_002681_210 0.1685008423 - - PREDICTED: uncharacterized protein LOC105633686 [Jatropha curcas]
20 Hb_003623_080 0.1686277224 - - PREDICTED: pheophytinase, chloroplastic [Populus euphratica]

Gene co-expression network

sample Hb_000184_010 Hb_000184_010 Hb_002641_020 Hb_002641_020 Hb_000184_010--Hb_002641_020 Hb_001488_250 Hb_001488_250 Hb_000184_010--Hb_001488_250 Hb_005000_110 Hb_005000_110 Hb_000184_010--Hb_005000_110 Hb_002272_210 Hb_002272_210 Hb_000184_010--Hb_002272_210 Hb_000329_500 Hb_000329_500 Hb_000184_010--Hb_000329_500 Hb_001159_050 Hb_001159_050 Hb_000184_010--Hb_001159_050 Hb_000510_180 Hb_000510_180 Hb_002641_020--Hb_000510_180 Hb_001102_130 Hb_001102_130 Hb_002641_020--Hb_001102_130 Hb_002641_020--Hb_001488_250 Hb_001662_090 Hb_001662_090 Hb_002641_020--Hb_001662_090 Hb_001864_050 Hb_001864_050 Hb_002641_020--Hb_001864_050 Hb_023344_090 Hb_023344_090 Hb_001488_250--Hb_023344_090 Hb_000128_040 Hb_000128_040 Hb_001488_250--Hb_000128_040 Hb_001488_250--Hb_005000_110 Hb_001343_030 Hb_001343_030 Hb_001488_250--Hb_001343_030 Hb_000719_030 Hb_000719_030 Hb_001488_250--Hb_000719_030 Hb_146225_020 Hb_146225_020 Hb_001488_250--Hb_146225_020 Hb_005000_110--Hb_001343_030 Hb_007597_030 Hb_007597_030 Hb_005000_110--Hb_007597_030 Hb_000808_130 Hb_000808_130 Hb_005000_110--Hb_000808_130 Hb_000962_090 Hb_000962_090 Hb_005000_110--Hb_000962_090 Hb_005000_110--Hb_023344_090 Hb_003623_080 Hb_003623_080 Hb_002272_210--Hb_003623_080 Hb_002272_210--Hb_001343_030 Hb_002272_210--Hb_007597_030 Hb_001006_040 Hb_001006_040 Hb_002272_210--Hb_001006_040 Hb_002272_210--Hb_146225_020 Hb_001975_120 Hb_001975_120 Hb_002272_210--Hb_001975_120 Hb_000020_090 Hb_000020_090 Hb_000329_500--Hb_000020_090 Hb_004102_060 Hb_004102_060 Hb_000329_500--Hb_004102_060 Hb_003680_060 Hb_003680_060 Hb_000329_500--Hb_003680_060 Hb_002818_150 Hb_002818_150 Hb_000329_500--Hb_002818_150 Hb_000982_100 Hb_000982_100 Hb_000329_500--Hb_000982_100 Hb_000329_500--Hb_005000_110 Hb_000155_020 Hb_000155_020 Hb_001159_050--Hb_000155_020 Hb_001424_010 Hb_001424_010 Hb_001159_050--Hb_001424_010 Hb_011013_040 Hb_011013_040 Hb_001159_050--Hb_011013_040 Hb_000025_700 Hb_000025_700 Hb_001159_050--Hb_000025_700 Hb_001159_050--Hb_002272_210 Hb_012395_090 Hb_012395_090 Hb_001159_050--Hb_012395_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0454656 0.379615 0.141248 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0490797 0 0 0.396328

CAGE analysis