Hb_000329_500

Information

Type -
Description -
Location Contig329: 365503-366600
Sequence    

Annotation

kegg
ID rcu:RCOM_1609640
description hypothetical protein
nr
ID XP_012083643.1
description PREDICTED: uncharacterized protein LOC105643180 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1B1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14584 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000329_500 0.0 - - PREDICTED: uncharacterized protein LOC105643180 isoform X1 [Jatropha curcas]
2 Hb_000020_090 0.1259905225 - - hypothetical protein JCGZ_09084 [Jatropha curcas]
3 Hb_004102_060 0.1278659124 - - JHL25H03.11 [Jatropha curcas]
4 Hb_003680_060 0.1313083002 - - hypothetical protein VITISV_022322 [Vitis vinifera]
5 Hb_002818_150 0.132952612 transcription factor TF Family: MYB hypothetical protein POPTR_0014s10680g [Populus trichocarpa]
6 Hb_000982_100 0.1356315263 transcription factor TF Family: bHLH PREDICTED: transcription factor PIF1-like isoform X1 [Jatropha curcas]
7 Hb_005000_110 0.1373396419 - - PREDICTED: uncharacterized protein LOC105637872 isoform X1 [Jatropha curcas]
8 Hb_009838_070 0.1374108145 - - PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Jatropha curcas]
9 Hb_000645_260 0.1377142397 - - PREDICTED: uncharacterized protein LOC105643508 [Jatropha curcas]
10 Hb_007597_030 0.1381823842 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_012395_090 0.1386094984 - - PREDICTED: protein PROTON GRADIENT REGULATION 5, chloroplastic [Jatropha curcas]
12 Hb_029695_090 0.1430906387 - - PREDICTED: probable inactive patatin-like protein 9 [Jatropha curcas]
13 Hb_001163_110 0.1432746363 - - PREDICTED: serine/threonine-protein kinase D6PKL2 [Jatropha curcas]
14 Hb_002702_010 0.1465800928 - - carbohydrate binding protein, putative [Ricinus communis]
15 Hb_002681_210 0.1466601127 - - PREDICTED: uncharacterized protein LOC105633686 [Jatropha curcas]
16 Hb_000313_250 0.1473595442 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
17 Hb_004650_050 0.1474836788 - - PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Jatropha curcas]
18 Hb_147378_010 0.1480401447 - - -
19 Hb_001379_120 0.1497836667 - - hypothetical protein POPTR_0001s29730g [Populus trichocarpa]
20 Hb_011013_040 0.1522104062 transcription factor TF Family: C2C2-YABBY unknown [Populus trichocarpa]

Gene co-expression network

sample Hb_000329_500 Hb_000329_500 Hb_000020_090 Hb_000020_090 Hb_000329_500--Hb_000020_090 Hb_004102_060 Hb_004102_060 Hb_000329_500--Hb_004102_060 Hb_003680_060 Hb_003680_060 Hb_000329_500--Hb_003680_060 Hb_002818_150 Hb_002818_150 Hb_000329_500--Hb_002818_150 Hb_000982_100 Hb_000982_100 Hb_000329_500--Hb_000982_100 Hb_005000_110 Hb_005000_110 Hb_000329_500--Hb_005000_110 Hb_002702_010 Hb_002702_010 Hb_000020_090--Hb_002702_010 Hb_000020_090--Hb_004102_060 Hb_012395_090 Hb_012395_090 Hb_000020_090--Hb_012395_090 Hb_000156_110 Hb_000156_110 Hb_000020_090--Hb_000156_110 Hb_004635_120 Hb_004635_120 Hb_000020_090--Hb_004635_120 Hb_000020_090--Hb_002818_150 Hb_002042_180 Hb_002042_180 Hb_004102_060--Hb_002042_180 Hb_000358_160 Hb_000358_160 Hb_004102_060--Hb_000358_160 Hb_000313_250 Hb_000313_250 Hb_004102_060--Hb_000313_250 Hb_004102_060--Hb_005000_110 Hb_027684_010 Hb_027684_010 Hb_004102_060--Hb_027684_010 Hb_009393_130 Hb_009393_130 Hb_003680_060--Hb_009393_130 Hb_009838_070 Hb_009838_070 Hb_003680_060--Hb_009838_070 Hb_000116_220 Hb_000116_220 Hb_003680_060--Hb_000116_220 Hb_004650_050 Hb_004650_050 Hb_003680_060--Hb_004650_050 Hb_091433_050 Hb_091433_050 Hb_003680_060--Hb_091433_050 Hb_000711_030 Hb_000711_030 Hb_003680_060--Hb_000711_030 Hb_000046_120 Hb_000046_120 Hb_002818_150--Hb_000046_120 Hb_000002_500 Hb_000002_500 Hb_002818_150--Hb_000002_500 Hb_001210_060 Hb_001210_060 Hb_002818_150--Hb_001210_060 Hb_005725_240 Hb_005725_240 Hb_002818_150--Hb_005725_240 Hb_001942_010 Hb_001942_010 Hb_002818_150--Hb_001942_010 Hb_000645_260 Hb_000645_260 Hb_000982_100--Hb_000645_260 Hb_004531_170 Hb_004531_170 Hb_000982_100--Hb_004531_170 Hb_002244_020 Hb_002244_020 Hb_000982_100--Hb_002244_020 Hb_000127_100 Hb_000127_100 Hb_000982_100--Hb_000127_100 Hb_000486_020 Hb_000486_020 Hb_000982_100--Hb_000486_020 Hb_004117_370 Hb_004117_370 Hb_000982_100--Hb_004117_370 Hb_001343_030 Hb_001343_030 Hb_005000_110--Hb_001343_030 Hb_007597_030 Hb_007597_030 Hb_005000_110--Hb_007597_030 Hb_000808_130 Hb_000808_130 Hb_005000_110--Hb_000808_130 Hb_000962_090 Hb_000962_090 Hb_005000_110--Hb_000962_090 Hb_023344_090 Hb_023344_090 Hb_005000_110--Hb_023344_090 Hb_001488_250 Hb_001488_250 Hb_005000_110--Hb_001488_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0337227 0.267725 1.7707 1 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0778108 0.122346 0 0.0248598 1.57819

CAGE analysis