Hb_000834_070

Information

Type -
Description -
Location Contig834: 54353-63099
Sequence    

Annotation

kegg
ID rcu:RCOM_1052720
description Protein cbxX, chromosomal, putative
nr
ID XP_012076692.1
description PREDICTED: tankyrase-1 isoform X4 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KN26
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07246 PE=4 SV=1
Gene Ontology
ID GO:0005515
description caseinolytic peptidase b protein homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000834_070 0.0 - - PREDICTED: tankyrase-1 isoform X4 [Jatropha curcas]
2 Hb_001300_250 0.2097935463 - - hypothetical protein JCGZ_22020 [Jatropha curcas]
3 Hb_007558_130 0.2102025356 - - -
4 Hb_003197_010 0.2232639172 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001728_120 0.2299005902 - - hypothetical protein POPTR_0001s15540g, partial [Populus trichocarpa]
6 Hb_004102_010 0.2349890195 - - F-box family protein [Theobroma cacao]
7 Hb_002073_110 0.2715843148 - - conserved hypothetical protein [Ricinus communis]
8 Hb_047418_010 0.2999955646 transcription factor TF Family: MYB PREDICTED: myb-related protein P [Jatropha curcas]
9 Hb_002534_010 0.3001025448 - - PREDICTED: expansin-A1-like [Jatropha curcas]
10 Hb_000329_580 0.300719989 - - malate dehydrogenase, putative [Ricinus communis]
11 Hb_002886_010 0.3019815817 - - conserved hypothetical protein [Ricinus communis]
12 Hb_017358_070 0.3020306248 - - snf1-kinase beta subunit, plants, putative [Ricinus communis]
13 Hb_005687_080 0.3032180652 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
14 Hb_003073_090 0.3035828549 transcription factor TF Family: B3 hypothetical protein POPTR_0004s23920g [Populus trichocarpa]
15 Hb_000445_120 0.3136725965 - - ATP binding protein, putative [Ricinus communis]
16 Hb_000525_070 0.3137657 - - PREDICTED: WAT1-related protein At5g40240-like [Jatropha curcas]
17 Hb_000264_040 0.3140597993 - - sugar transporter, putative [Ricinus communis]
18 Hb_041813_080 0.3159347178 - - -
19 Hb_000012_010 0.3179070374 - - hypothetical protein JCGZ_07709 [Jatropha curcas]
20 Hb_003164_010 0.3184095757 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000834_070 Hb_000834_070 Hb_001300_250 Hb_001300_250 Hb_000834_070--Hb_001300_250 Hb_007558_130 Hb_007558_130 Hb_000834_070--Hb_007558_130 Hb_003197_010 Hb_003197_010 Hb_000834_070--Hb_003197_010 Hb_001728_120 Hb_001728_120 Hb_000834_070--Hb_001728_120 Hb_004102_010 Hb_004102_010 Hb_000834_070--Hb_004102_010 Hb_002073_110 Hb_002073_110 Hb_000834_070--Hb_002073_110 Hb_001300_250--Hb_001728_120 Hb_003073_090 Hb_003073_090 Hb_001300_250--Hb_003073_090 Hb_001300_250--Hb_002073_110 Hb_001300_250--Hb_003197_010 Hb_003164_010 Hb_003164_010 Hb_001300_250--Hb_003164_010 Hb_004024_020 Hb_004024_020 Hb_007558_130--Hb_004024_020 Hb_030627_010 Hb_030627_010 Hb_007558_130--Hb_030627_010 Hb_007558_130--Hb_004102_010 Hb_000062_210 Hb_000062_210 Hb_007558_130--Hb_000062_210 Hb_012490_020 Hb_012490_020 Hb_007558_130--Hb_012490_020 Hb_000077_360 Hb_000077_360 Hb_003197_010--Hb_000077_360 Hb_003197_010--Hb_004102_010 Hb_001488_190 Hb_001488_190 Hb_003197_010--Hb_001488_190 Hb_017358_070 Hb_017358_070 Hb_003197_010--Hb_017358_070 Hb_000477_040 Hb_000477_040 Hb_003197_010--Hb_000477_040 Hb_000445_120 Hb_000445_120 Hb_003197_010--Hb_000445_120 Hb_001728_120--Hb_003164_010 Hb_002045_080 Hb_002045_080 Hb_001728_120--Hb_002045_080 Hb_001728_120--Hb_003073_090 Hb_001587_170 Hb_001587_170 Hb_001728_120--Hb_001587_170 Hb_000365_370 Hb_000365_370 Hb_004102_010--Hb_000365_370 Hb_004102_010--Hb_017358_070 Hb_000389_050 Hb_000389_050 Hb_004102_010--Hb_000389_050 Hb_000107_510 Hb_000107_510 Hb_004102_010--Hb_000107_510 Hb_002534_010 Hb_002534_010 Hb_002073_110--Hb_002534_010 Hb_041813_080 Hb_041813_080 Hb_002073_110--Hb_041813_080 Hb_004218_300 Hb_004218_300 Hb_002073_110--Hb_004218_300 Hb_063866_010 Hb_063866_010 Hb_002073_110--Hb_063866_010 Hb_005228_060 Hb_005228_060 Hb_002073_110--Hb_005228_060 Hb_004291_030 Hb_004291_030 Hb_002073_110--Hb_004291_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.194974 0.141142 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0656897 0.233798 0 0.518166

CAGE analysis