Hb_004218_300

Information

Type -
Description -
Location Contig4218: 284219-288771
Sequence    

Annotation

kegg
ID rcu:RCOM_1452400
description phosphatidylinositol-4-phosphate 5-kinase, putative (EC:2.7.1.68)
nr
ID KDP40535.1
description hypothetical protein JCGZ_24534 [Jatropha curcas]
swissprot
ID Q9SFB8
description Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana GN=PIP5K6 PE=2 SV=1
trembl
ID A0A067L7P8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24534 PE=4 SV=1
Gene Ontology
ID GO:0016324
description phosphatidylinositol 4-phosphate 5-kinase 6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004218_300 0.0 - - hypothetical protein JCGZ_24534 [Jatropha curcas]
2 Hb_002073_110 0.198523675 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000638_100 0.2006365801 - - PREDICTED: histone deacetylase 14 [Jatropha curcas]
4 Hb_004724_260 0.2055211736 - - PREDICTED: 40S ribosomal protein S14-2-like [Gossypium raimondii]
5 Hb_006915_010 0.2064539703 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
6 Hb_031330_020 0.2089070412 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
7 Hb_002014_070 0.210563238 - - PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic isoform X1 [Jatropha curcas]
8 Hb_000979_260 0.2109103786 - - ARF GTPase activator, putative [Ricinus communis]
9 Hb_000252_180 0.2127103999 - - Glutamate--glyoxylate aminotransferase 2 [Morus notabilis]
10 Hb_001579_280 0.2143430376 - - PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal-like [Jatropha curcas]
11 Hb_011242_010 0.2181207393 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 [Jatropha curcas]
12 Hb_000975_050 0.2188575274 - - PREDICTED: inner membrane protein PPF-1, chloroplastic [Jatropha curcas]
13 Hb_000108_250 0.2198605109 - - PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Jatropha curcas]
14 Hb_003053_070 0.2216621408 - - PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic [Jatropha curcas]
15 Hb_017098_060 0.2249490943 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Pyrus x bretschneideri]
16 Hb_004837_100 0.2250247291 - - PREDICTED: dicarboxylate transporter 1, chloroplastic [Jatropha curcas]
17 Hb_001365_010 0.2251920787 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
18 Hb_001331_010 0.2255010956 - - hypothetical protein CISIN_1g039303mg, partial [Citrus sinensis]
19 Hb_000966_040 0.2261524892 - - hypothetical protein JCGZ_01642 [Jatropha curcas]
20 Hb_004724_170 0.2265051366 - - PREDICTED: rho GTPase-activating protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_004218_300 Hb_004218_300 Hb_002073_110 Hb_002073_110 Hb_004218_300--Hb_002073_110 Hb_000638_100 Hb_000638_100 Hb_004218_300--Hb_000638_100 Hb_004724_260 Hb_004724_260 Hb_004218_300--Hb_004724_260 Hb_006915_010 Hb_006915_010 Hb_004218_300--Hb_006915_010 Hb_031330_020 Hb_031330_020 Hb_004218_300--Hb_031330_020 Hb_002014_070 Hb_002014_070 Hb_004218_300--Hb_002014_070 Hb_002534_010 Hb_002534_010 Hb_002073_110--Hb_002534_010 Hb_041813_080 Hb_041813_080 Hb_002073_110--Hb_041813_080 Hb_063866_010 Hb_063866_010 Hb_002073_110--Hb_063866_010 Hb_005228_060 Hb_005228_060 Hb_002073_110--Hb_005228_060 Hb_004291_030 Hb_004291_030 Hb_002073_110--Hb_004291_030 Hb_000638_100--Hb_006915_010 Hb_000638_100--Hb_004724_260 Hb_000041_250 Hb_000041_250 Hb_000638_100--Hb_000041_250 Hb_004052_030 Hb_004052_030 Hb_000638_100--Hb_004052_030 Hb_002943_020 Hb_002943_020 Hb_000638_100--Hb_002943_020 Hb_002122_070 Hb_002122_070 Hb_000638_100--Hb_002122_070 Hb_000033_010 Hb_000033_010 Hb_004724_260--Hb_000033_010 Hb_004724_260--Hb_006915_010 Hb_006198_040 Hb_006198_040 Hb_004724_260--Hb_006198_040 Hb_004724_260--Hb_002122_070 Hb_001652_130 Hb_001652_130 Hb_004724_260--Hb_001652_130 Hb_006915_010--Hb_000041_250 Hb_004162_250 Hb_004162_250 Hb_006915_010--Hb_004162_250 Hb_000107_540 Hb_000107_540 Hb_006915_010--Hb_000107_540 Hb_000679_320 Hb_000679_320 Hb_006915_010--Hb_000679_320 Hb_001541_280 Hb_001541_280 Hb_006915_010--Hb_001541_280 Hb_000300_680 Hb_000300_680 Hb_031330_020--Hb_000300_680 Hb_001916_150 Hb_001916_150 Hb_031330_020--Hb_001916_150 Hb_003778_020 Hb_003778_020 Hb_031330_020--Hb_003778_020 Hb_000975_050 Hb_000975_050 Hb_031330_020--Hb_000975_050 Hb_134813_010 Hb_134813_010 Hb_031330_020--Hb_134813_010 Hb_011053_020 Hb_011053_020 Hb_031330_020--Hb_011053_020 Hb_053998_020 Hb_053998_020 Hb_002014_070--Hb_053998_020 Hb_041813_060 Hb_041813_060 Hb_002014_070--Hb_041813_060 Hb_002972_030 Hb_002972_030 Hb_002014_070--Hb_002972_030 Hb_005332_150 Hb_005332_150 Hb_002014_070--Hb_005332_150 Hb_000029_380 Hb_000029_380 Hb_002014_070--Hb_000029_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0977875 0.339104 0.238324 0 0.0305481
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0186996 0 0.224157 0.163671 0.968403

CAGE analysis