Hb_000107_510

Information

Type -
Description -
Location Contig107: 360731-363720
Sequence    

Annotation

kegg
ID pop:POPTR_0004s21700g
description hypothetical protein
nr
ID AIY24427.1
description phosphate transporter [Manihot esculenta]
swissprot
ID Q7DNC3
description Mitochondrial phosphate carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MPT1 PE=2 SV=1
trembl
ID A0A0A1E5Q3
description Phosphate transporter OS=Manihot esculenta GN=PT3;5 PE=2 SV=1
Gene Ontology
ID GO:0016021
description mitochondrial phosphate carrier protein mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02199: 360725-363681
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000107_510 0.0 - - phosphate transporter [Manihot esculenta]
2 Hb_062522_010 0.1213035174 - - -
3 Hb_000167_050 0.137896977 - - PREDICTED: uncharacterized protein LOC105641106 [Jatropha curcas]
4 Hb_031527_110 0.1406991016 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
5 Hb_000365_370 0.1417507801 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001904_050 0.1448613387 - - alpha-tubulin 1 [Hevea brasiliensis]
7 Hb_002174_040 0.1532344695 - - DNAJ heat shock family protein [Theobroma cacao]
8 Hb_002184_090 0.1600657665 - - DNA binding protein, putative [Ricinus communis]
9 Hb_065525_120 0.1604134605 - - dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
10 Hb_000465_320 0.1619727579 - - PREDICTED: nudix hydrolase 8 [Jatropha curcas]
11 Hb_007101_110 0.1626360117 - - PREDICTED: nucleobase-ascorbate transporter 7 [Jatropha curcas]
12 Hb_004257_010 0.1637985856 - - CMP-sialic acid transporter, putative [Ricinus communis]
13 Hb_003453_050 0.1643650907 - - PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-3-like [Jatropha curcas]
14 Hb_001671_030 0.1655574362 - - PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type [Jatropha curcas]
15 Hb_000008_400 0.1670811185 - - PREDICTED: classical arabinogalactan protein 10-like [Nicotiana tomentosiformis]
16 Hb_004814_010 0.1707118562 - - PREDICTED: uncharacterized protein LOC105633486 [Jatropha curcas]
17 Hb_000032_370 0.1712499676 - - PREDICTED: nucleoside diphosphate kinase III, chloroplastic/mitochondrial-like [Citrus sinensis]
18 Hb_007110_010 0.1715949635 - - PREDICTED: accessory gland protein Acp36DE [Jatropha curcas]
19 Hb_012244_010 0.1724753061 - - PREDICTED: uncharacterized protein LOC105641034 [Jatropha curcas]
20 Hb_000300_700 0.1727206554 - - PREDICTED: adenylyl-sulfate kinase 3 [Jatropha curcas]

Gene co-expression network

sample Hb_000107_510 Hb_000107_510 Hb_062522_010 Hb_062522_010 Hb_000107_510--Hb_062522_010 Hb_000167_050 Hb_000167_050 Hb_000107_510--Hb_000167_050 Hb_031527_110 Hb_031527_110 Hb_000107_510--Hb_031527_110 Hb_000365_370 Hb_000365_370 Hb_000107_510--Hb_000365_370 Hb_001904_050 Hb_001904_050 Hb_000107_510--Hb_001904_050 Hb_002174_040 Hb_002174_040 Hb_000107_510--Hb_002174_040 Hb_004257_010 Hb_004257_010 Hb_062522_010--Hb_004257_010 Hb_062522_010--Hb_002174_040 Hb_000789_120 Hb_000789_120 Hb_062522_010--Hb_000789_120 Hb_001242_080 Hb_001242_080 Hb_062522_010--Hb_001242_080 Hb_012244_010 Hb_012244_010 Hb_062522_010--Hb_012244_010 Hb_000638_160 Hb_000638_160 Hb_000167_050--Hb_000638_160 Hb_000394_180 Hb_000394_180 Hb_000167_050--Hb_000394_180 Hb_000723_290 Hb_000723_290 Hb_000167_050--Hb_000723_290 Hb_009780_050 Hb_009780_050 Hb_000167_050--Hb_009780_050 Hb_005846_030 Hb_005846_030 Hb_000167_050--Hb_005846_030 Hb_000176_010 Hb_000176_010 Hb_000167_050--Hb_000176_010 Hb_031527_110--Hb_002174_040 Hb_031527_110--Hb_001904_050 Hb_000962_070 Hb_000962_070 Hb_031527_110--Hb_000962_070 Hb_000181_350 Hb_000181_350 Hb_031527_110--Hb_000181_350 Hb_042083_040 Hb_042083_040 Hb_031527_110--Hb_042083_040 Hb_007441_080 Hb_007441_080 Hb_031527_110--Hb_007441_080 Hb_000365_370--Hb_000723_290 Hb_003453_050 Hb_003453_050 Hb_000365_370--Hb_003453_050 Hb_000365_370--Hb_000167_050 Hb_010577_040 Hb_010577_040 Hb_000365_370--Hb_010577_040 Hb_004128_070 Hb_004128_070 Hb_000365_370--Hb_004128_070 Hb_006711_090 Hb_006711_090 Hb_001904_050--Hb_006711_090 Hb_000742_020 Hb_000742_020 Hb_001904_050--Hb_000742_020 Hb_154038_020 Hb_154038_020 Hb_001904_050--Hb_154038_020 Hb_001904_050--Hb_007441_080 Hb_001904_050--Hb_000181_350 Hb_012573_050 Hb_012573_050 Hb_002174_040--Hb_012573_050 Hb_002174_040--Hb_000181_350 Hb_001663_040 Hb_001663_040 Hb_002174_040--Hb_001663_040 Hb_011224_100 Hb_011224_100 Hb_002174_040--Hb_011224_100 Hb_002184_090 Hb_002184_090 Hb_002174_040--Hb_002184_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.98004 1.44417 26.4036 39.5466 4.43781 6.66973
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.033 27.0359 32.4118 3.86546 30.5146

CAGE analysis